RNA–Protein interactions for RNA: YDL007W

RPT2, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT2, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT2	YDL007W	PRE4	P30657	266 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	CTF13	P35203	478 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	SPT10	P35208	640 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	SHE1	P38200	338 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	SLM1	P40485	686 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	POP1	P41812	875 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	PFA3	P42836	336 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	PRM10	P42946	383 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	MNT2	P53059	558 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	SDT1	P53078	280 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	ERV14	P53173	138 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	VOA1	P53262	265 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	TPS1	Q00764	495 aa	Known RBP	4.98	□□□□□ -1.61
RPT2	YDL007W	CTK1	Q03957	528 aa	Known RBP	4.98	□□□□□ -1.61
RPT2	YDL007W	YDR387C	Q04162	555 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	DCR2	Q05924	578 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	VID22	Q05934	901 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	GAS2	Q06135	555 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	ANT1	Q06497	328 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	CYK3	Q07533	885 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	HBT1	Q07653	1046 aa	Known RBP	4.98	□□□□□ -1.61
RPT2	YDL007W	RPN5	Q12250	445 aa	Known RBP	4.98	□□□□□ -1.61
RPT2	YDL007W	RDI1	Q12434	202 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	MRX4	Q12467	430 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	YPR145C-A	Q2V2P0	78 aa		4.98	□□□□□ -1.61
RPT2	YDL007W	BEM2	P39960	2167 aa	Known RBP	4.98	□□□□□ -1.61
RPT2	YDL007W	HIS1	P00498	297 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	MSF1	P08425	469 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	ERD1	P16151	362 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	CDC23	P16522	626 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	GLK1	P17709	500 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	PRE7	P23724	241 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	MRP20	P32387	263 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	MF(ALPHA)2	P32435	120 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	KRE6	P32486	720 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YKL097C	P34245	136 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YPT52	P36018	234 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	TCM62	P38228	572 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	COS111	P38308	924 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YHL041W	P38730	149 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	LSM4	P40070	187 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	BMT5	P40493	336 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	IME4	P41833	600 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YGR201C	P42936	225 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	DPB11	P47027	764 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	PET130	P47065	347 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	AIM25	P47140	327 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	EFM6	P53970	246 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YMR210W	Q03649	449 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	SPG3	Q04398	127 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	AIM32	Q04689	311 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YMR321C	Q04898	105 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	RRP45	Q05636	305 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	HRD3	Q05787	833 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	LUC7	Q07508	261 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	GRC3	Q07845	632 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	TMS1	Q12116	473 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YPL245W	Q12179	454 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	YLR099W-A	Q3E798	87 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	MEX67	Q99257	599 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	MSB2	P32334	1306 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	CCH1	P50077	2039 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	PET9	P18239	318 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	SEC22	P22214	214 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	DCC1	P25559	380 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	BUB3	P26449	341 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	VPH1	P32563	840 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	SUA5	P32579	426 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	ECT1	P33412	323 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	SSS1	P35179	80 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	SRP102	P36057	244 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RPT2	YDL007W	YCR087C-A	P37263	153 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	AVT5	P38176	459 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	ATG8	P38182	117 aa	RIP-Chip data	4.97	□□□□□ -1.61	not detected
RPT2	YDL007W	RTC2	P38279	296 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	MTC4	P38335	694 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	GND1	P38720	489 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	RPP1	P38786	293 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	CDC1	P40986	491 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	DLD2	P46681	530 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	TAX4	P47030	604 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YJR111C	P47148	283 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	RAD17	P48581	401 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	RSM27	P53305	110 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	SAY1	P53324	424 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	EGD1	Q02642	157 aa	Known RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	YPL108W	Q02872	168 aa	Predicted RBP	4.97	□□□□□ -1.61
RPT2	YDL007W	SSK1	Q07084	712 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	LDB18	Q07887	179 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	NDD1	Q08887	554 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	SFM1	Q12314	213 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	ARP7	Q12406	477 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	MHT1	Q12525	324 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	SET6	Q12529	373 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	YCL001W-B	Q96VH2	84 aa		4.97	□□□□□ -1.61
RPT2	YDL007W	RPL25	P04456	142 aa	Known RBP	4.96	□□□□□ -1.62
RPT2	YDL007W	PRB1	P09232	635 aa		4.96	□□□□□ -1.62
RPT2	YDL007W	HOM3	P10869	527 aa		4.96	□□□□□ -1.62
RPT2	YDL007W	NAM2	P11325	894 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms