RNA–Protein interactions for RNA: YCL001W

RER1, Transcript of Protein involved in retention of membrane proteins, yeastyeast

Gene RER1, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RER1YCL001W PMT4P46971 762 aa3.97□□□□□ -1.77
RER1YCL001W APS3P47064 194 aa3.97□□□□□ -1.77
RER1YCL001W YGR066CP53242 292 aa3.97□□□□□ -1.77
RER1YCL001W YGR067CP53243 804 aa3.97□□□□□ -1.77
RER1YCL001W ERP1Q05359 219 aaKnown RBP3.97□□□□□ -1.77
RER1YCL001W FMP45Q07651 309 aa3.97□□□□□ -1.77
RER1YCL001W YOR376WQ08900 122 aa3.97□□□□□ -1.77
RER1YCL001W FDH1Q08911 376 aa3.97□□□□□ -1.77
RER1YCL001W SLH1P53327 1967 aaKnown RBP3.96□□□□□ -1.77
RER1YCL001W YSF3P0C074 85 aaPredicted RBP3.96□□□□□ -1.78
RER1YCL001W RPL20AP0CX23 172 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W RPL20BP0CX24 172 aaPredicted RBP3.96□□□□□ -1.78
RER1YCL001W UNG1P12887 359 aa3.96□□□□□ -1.78
RER1YCL001W NUP2P32499 720 aa3.96□□□□□ -1.78
RER1YCL001W MTR2P34232 184 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W RPL32P38061 130 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W FES1P38260 290 aa3.96□□□□□ -1.78
RER1YCL001W YHR177WP38867 453 aa3.96□□□□□ -1.78
RER1YCL001W MNN9P39107 395 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W RGI1P40043 161 aaPredicted RBP3.96□□□□□ -1.78
RER1YCL001W SGN1P40561 250 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
RER1YCL001W PAC10P48363 199 aa3.96□□□□□ -1.78
RER1YCL001W RPS12P48589 143 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W IMD4P50094 524 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W ATP22P50273 684 aaPredicted RBP3.96□□□□□ -1.78
RER1YCL001W MIG2P53035 382 aa3.96□□□□□ -1.78
RER1YCL001W CDH1P53197 566 aa3.96□□□□□ -1.78
RER1YCL001W ADD37Q03233 198 aa3.96□□□□□ -1.78
RER1YCL001W YDR476CQ03362 224 aa3.96□□□□□ -1.78
RER1YCL001W YDR209CQ03480 137 aa3.96□□□□□ -1.78
RER1YCL001W ATG38Q05789 226 aaKnown RBP3.96□□□□□ -1.78
RER1YCL001W COS7Q07788 383 aa3.96□□□□□ -1.78
RER1YCL001W YOR342CQ12182 319 aa3.96□□□□□ -1.78
RER1YCL001W RPN6Q12377 434 aa3.96□□□□□ -1.78
RER1YCL001W SNF8Q12483 233 aa3.96□□□□□ -1.78
RER1YCL001W YOS9Q99220 542 aa3.96□□□□□ -1.78
RER1YCL001W DFR1P07807 211 aaKnown RBP RIP-Chip data3.95□□□□□ -1.78not detected
RER1YCL001W CCA1P21269 546 aa3.95□□□□□ -1.78
RER1YCL001W MCK1P21965 375 aaKnown RBP3.95□□□□□ -1.78
RER1YCL001W AGA1P32323 725 aa3.95□□□□□ -1.78
RER1YCL001W TOA1P32773 286 aa3.95□□□□□ -1.78
RER1YCL001W YOR062CP36025 268 aa3.95□□□□□ -1.78
RER1YCL001W LYS12P40495 371 aaKnown RBP3.95□□□□□ -1.78
RER1YCL001W YJR141WP47172 347 aaPredicted RBP3.95□□□□□ -1.78
RER1YCL001W SEH1P53011 349 aaKnown RBP3.95□□□□□ -1.78
RER1YCL001W TPC1P53257 314 aa3.95□□□□□ -1.78
RER1YCL001W DUG3P53871 357 aa3.95□□□□□ -1.78
RER1YCL001W IGO1P53897 168 aa3.95□□□□□ -1.78
RER1YCL001W YLR460CP54007 376 aa3.95□□□□□ -1.78
RER1YCL001W HSP31Q04432 237 aa3.95□□□□□ -1.78
RER1YCL001W YLL007CQ07799 665 aa3.95□□□□□ -1.78
RER1YCL001W SNX3Q08826 162 aaKnown RBP3.95□□□□□ -1.78
RER1YCL001W ARG3P05150 338 aa3.94□□□□□ -1.78
RER1YCL001W RPL43AP0CX25 92 aaKnown RBP3.94□□□□□ -1.78
RER1YCL001W RPL43BP0CX26 92 aa3.94□□□□□ -1.78
RER1YCL001W GPI12P23797 304 aa3.94□□□□□ -1.78
RER1YCL001W GRR1P24814 1151 aa3.94□□□□□ -1.78
RER1YCL001W CLB3P24870 427 aa3.94□□□□□ -1.78
RER1YCL001W CTR86P25355 563 aa3.94□□□□□ -1.78
RER1YCL001W SNC1P31109 117 aa3.94□□□□□ -1.78
RER1YCL001W ATS1P31386 333 aa3.94□□□□□ -1.78
RER1YCL001W RPT5P33297 434 aaKnown RBP3.94□□□□□ -1.78
RER1YCL001W VPS51P36116 164 aa3.94□□□□□ -1.78
RER1YCL001W OM14P38325 134 aa3.94□□□□□ -1.78
RER1YCL001W PHB1P40961 287 aa3.94□□□□□ -1.78
RER1YCL001W ARF3P40994 183 aaRIP-Chip data3.94□□□□□ -1.78not detected
RER1YCL001W USE1P53146 245 aa3.94□□□□□ -1.78
RER1YCL001W YGR126WP53274 230 aa3.94□□□□□ -1.78
RER1YCL001W SMM1P53720 384 aaKnown RBP3.94□□□□□ -1.78
RER1YCL001W SKI8Q02793 397 aaPredicted RBP3.94□□□□□ -1.78
RER1YCL001W YMR010WQ03687 405 aa3.94□□□□□ -1.78
RER1YCL001W DYN3Q04949 312 aa3.94□□□□□ -1.78
RER1YCL001W SSK1Q07084 712 aa3.94□□□□□ -1.78
RER1YCL001W MFG1Q07684 458 aa3.94□□□□□ -1.78
RER1YCL001W YLR036CQ07986 203 aa3.94□□□□□ -1.78
RER1YCL001W YPR202WQ08993 238 aa3.94□□□□□ -1.78
RER1YCL001W RLM1Q12224 676 aa3.94□□□□□ -1.78
RER1YCL001W SET6Q12529 373 aa3.94□□□□□ -1.78
RER1YCL001W ZWF1P11412 505 aaKnown RBP3.93□□□□□ -1.78
RER1YCL001W RNA1P11745 407 aaKnown RBP3.93□□□□□ -1.78
RER1YCL001W GAL3P13045 520 aa3.93□□□□□ -1.78
RER1YCL001W UGA1P17649 471 aa3.93□□□□□ -1.78
RER1YCL001W RPS1BP23248 255 aaKnown RBP3.93□□□□□ -1.78
RER1YCL001W ATP7P30902 174 aa3.93□□□□□ -1.78
RER1YCL001W DEP1P31385 405 aa3.93□□□□□ -1.78
RER1YCL001W MKK1P32490 508 aa3.93□□□□□ -1.78
RER1YCL001W RCK1P38622 512 aa3.93□□□□□ -1.78
RER1YCL001W LAG1P38703 411 aa3.93□□□□□ -1.78
RER1YCL001W YEL057CP39983 233 aa3.93□□□□□ -1.78
RER1YCL001W RPR2P40571 144 aa3.93□□□□□ -1.78
RER1YCL001W IRC6P43615 237 aa3.93□□□□□ -1.78
RER1YCL001W EMC2P47133 292 aaKnown RBP3.93□□□□□ -1.78
RER1YCL001W MPA43P53583 542 aaPredicted RBP3.93□□□□□ -1.78
RER1YCL001W MRPL19P53875 158 aa3.93□□□□□ -1.78
RER1YCL001W NCE101Q02820 53 aa3.93□□□□□ -1.78
RER1YCL001W CGI121Q03705 181 aaKnown RBP3.93□□□□□ -1.78
RER1YCL001W DCR2Q05924 578 aa3.93□□□□□ -1.78
RER1YCL001W MUM3Q08750 479 aa3.93□□□□□ -1.78
RER1YCL001W MDM32Q12171 622 aa3.93□□□□□ -1.78
RER1YCL001W SKS1Q12505 502 aa3.93□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms