RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	MSN4	P33749	630 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	YKL187C	P34231	750 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	SOL2	P37262	315 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	SHE1	P38200	338 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	OM14	P38325	134 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	OXA1	P39952	402 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	RTR1	P40084	226 aa	Predicted RBP	2.5	□□□□□ -2.01
AIM4	YBR194W	OTU1	P43558	301 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	TIM21	P53220	239 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	VHT1	P53241	593 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	YET2	Q04210	160 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	MHR1	Q06630	226 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	SDO1	Q07953	250 aa	Known RBP	2.5	□□□□□ -2.01
AIM4	YBR194W	TFC7	Q12415	435 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	ATG31	Q12421	196 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	LAG2	Q92325	660 aa		2.5	□□□□□ -2.01
AIM4	YBR194W	SPS100	P13130	326 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	CDC50	P25656	391 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	KRE6	P32486	720 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	MRPL6	P32904	214 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	2.49	□□□□□ -2.01	not detected
AIM4	YBR194W	YKT6	P36015	200 aa	Known RBP	2.49	□□□□□ -2.01
AIM4	YBR194W	AIM29	P36154	155 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	SWD3	P38123	315 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	MRX3	P38172	270 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	SHE3	P38272	425 aa	Known RBP	2.49	□□□□□ -2.01
AIM4	YBR194W	YPC1	P38298	316 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	PRS2	P38620	318 aa	Known RBP	2.49	□□□□□ -2.01
AIM4	YBR194W	UTP18	P40362	594 aa	Predicted RBP	2.49	□□□□□ -2.01
AIM4	YBR194W	MSS2	P40990	351 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	GAB1	P41733	394 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	CGR1	P53188	120 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	YGR015C	P53208	328 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	PGA2	P53903	129 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	RNH201	P53942	307 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	KTR6	P54070	446 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	ENT5	Q03769	411 aa	Known RBP	2.49	□□□□□ -2.01
AIM4	YBR194W	CSM4	Q08955	156 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	VIK1	Q12045	647 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	ADF1	Q2V2Q1	113 aa		2.49	□□□□□ -2.01
AIM4	YBR194W	TDH2	P00358	332 aa	Known RBP	2.48	□□□□□ -2.01
AIM4	YBR194W	PRB1	P09232	635 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	CDC42	P19073	191 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	ZRC1	P20107	442 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	RNA15	P25299	296 aa	Predicted RBP	2.48	□□□□□ -2.01
AIM4	YBR194W	SPT4	P32914	102 aa	Predicted RBP	2.48	□□□□□ -2.01
AIM4	YBR194W	BIG1	P38813	335 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	PEX22	P39718	180 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	ASG7	P46993	209 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	YJR054W	P47114	497 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	SDT1	P53078	280 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	SDS23	P53172	527 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	NRM1	P53718	249 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	YLR152C	P54072	576 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	SCS7	Q03529	384 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	OST6	Q03723	332 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	GMC1	Q04399	608 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	TAF9	Q05027	157 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	PAL1	Q05518	499 aa	Known RBP	2.48	□□□□□ -2.01
AIM4	YBR194W	YLR177W	Q06251	628 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	PER33	Q12144	273 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	MSH5	Q12175	901 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	SME1	Q12330	94 aa	Predicted RBP	2.48	□□□□□ -2.01
AIM4	YBR194W	HRT3	Q12347	344 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	YBL111C	Q3E7Y5	667 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	YOS9	Q99220	542 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	BI3	Q9ZZW7	517 aa		2.48	□□□□□ -2.01
AIM4	YBR194W	RPS14A	P06367	137 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	BGL2	P15703	313 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	MRPL20	P22354	195 aa	Predicted RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	PEX3	P28795	441 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	TPS2	P31688	896 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	AEP1	P32493	518 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	DOA4	P32571	926 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	BAT1	P38891	393 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	TIM17	P39515	158 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	RPS14B	P39516	138 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	MIG3	P39943	394 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	HEM14	P40012	539 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	RPL10	P41805	221 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	IBA57	P47158	497 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	YGL039W	P53183	348 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	CDH1	P53197	566 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	TPC1	P53257	314 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	YML018C	Q03730	393 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	GTO3	Q04806	366 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	DPP1	Q05521	289 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	SFH1	Q06168	426 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	PEX30	Q06169	523 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	CTR3	Q06686	241 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	TMC1	Q08422	150 aa	Predicted RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	RRG7	Q08774	242 aa	Predicted RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	YOR029W	Q12243	111 aa		2.47	□□□□□ -2.01
AIM4	YBR194W	CFT1	Q06632	1357 aa	Known RBP	2.47	□□□□□ -2.01
AIM4	YBR194W	SAC3	P46674	1301 aa		2.46	□□□□□ -2.02
AIM4	YBR194W	JIP3	O13555	125 aa		2.46	□□□□□ -2.02
AIM4	YBR194W	SOD1	P00445	154 aa	Known RBP	2.46	□□□□□ -2.02
AIM4	YBR194W	CMK2	P22517	447 aa		2.46	□□□□□ -2.02
AIM4	YBR194W	RPL24B	P24000	155 aa	Known RBP	2.46	□□□□□ -2.02
AIM4	YBR194W	POF1	P25576	258 aa		2.46	□□□□□ -2.02

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms