RNA–Protein interactions for RNA: YBL102W

SFT2, Transcript of Tetra-spanning membrane protein found mostly in the late Golgi, yeast

Gene SFT2, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SFT2	YBL102W	SPC19	Q03954	165 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	ROY1	Q04847	553 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	FMP42	Q04991	504 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	YLR281C	Q05863	155 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	YLR036C	Q07986	203 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	REX4	Q08237	289 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	YOR342C	Q12182	319 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	IES3	Q12345	250 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	MHF1	Q3E835	90 aa		4.67	□□□□□ -1.66
SFT2	YBL102W	RPS1B	P23248	255 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	SLM5	P25345	492 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	RRP7	P25368	297 aa	Predicted RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	UBC8	P28263	218 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	RPN2	P32565	945 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	MRPL6	P32904	214 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	RPT5	P33297	434 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	ECM15	P35195	104 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	BNA4	P38169	460 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	BIG1	P38813	335 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	MBB1	P39534	108 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	ZIM17	P42844	174 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	HOC1	P47124	396 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	RPS12	P48589	143 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	SAM50	P53969	484 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	RCF1	Q03713	159 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	YDR415C	Q04033	374 aa	Predicted RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	RBS1	Q05672	457 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	DTD1	Q07648	150 aa	Known RBP	4.66	□□□□□ -1.66
SFT2	YBL102W	YOL131W	Q08270	108 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	FDH1	Q08911	376 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	SRO7	Q12038	1033 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	NAG1	Q8TGN9	163 aa		4.66	□□□□□ -1.66
SFT2	YBL102W	ZWF1	P11412	505 aa	Known RBP	4.65	□□□□□ -1.67
SFT2	YBL102W	MER1	P16523	270 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	PPH21	P23594	369 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	SRX1	P36077	127 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	RIB1	P38066	345 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	ARA1	P38115	344 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	TIF34	P40217	347 aa	Known RBP	4.65	□□□□□ -1.67
SFT2	YBL102W	LYS12	P40495	371 aa	Known RBP	4.65	□□□□□ -1.67
SFT2	YBL102W	YRB2	P40517	327 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	TRM82	Q03774	444 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	WTM1	Q12363	437 aa	Known RBP	4.65	□□□□□ -1.67
SFT2	YBL102W	MED11	Q99278	115 aa		4.65	□□□□□ -1.67
SFT2	YBL102W	CDC23	P16522	626 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	IDH2	P28241	369 aa	Known RBP	4.64	□□□□□ -1.67
SFT2	YBL102W	VMA6	P32366	345 aa	Known RBP	4.64	□□□□□ -1.67
SFT2	YBL102W	RML2	P32611	393 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	GDH2	P33327	1092 aa	Known RBP	4.64	□□□□□ -1.67
SFT2	YBL102W	HCS1	P34243	683 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	PRP39	P39682	629 aa	Known RBP	4.64	□□□□□ -1.67
SFT2	YBL102W	PRM10	P42946	383 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	NQM1	P53228	333 aa	Predicted RBP	4.64	□□□□□ -1.67
SFT2	YBL102W	COG5	P53951	403 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	NUP53	Q03790	475 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	APC4	Q04601	652 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	ARR1	Q06596	294 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	YDR262W	Q12331	272 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	MRX4	Q12467	430 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	RRP12	Q12754	1228 aa	Known RBP	4.64	□□□□□ -1.67
SFT2	YBL102W	YKL018C-A	Q3E7A7	99 aa		4.64	□□□□□ -1.67
SFT2	YBL102W	TIM9	O74700	87 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	REP1	P03871	373 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	TPK3	P05986	398 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	GAL7	P08431	366 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	DPB2	P24482	689 aa	Predicted RBP	4.63	□□□□□ -1.67
SFT2	YBL102W	CTR86	P25355	563 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	HIR2	P32480	875 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	CYS4	P32582	507 aa	Known RBP	4.63	□□□□□ -1.67
SFT2	YBL102W	CDC13	P32797	924 aa	Known RBP	4.63	□□□□□ -1.67
SFT2	YBL102W	VPS17	P32913	551 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	UTP11	P34247	250 aa	Predicted RBP	4.63	□□□□□ -1.67
SFT2	YBL102W	DOA1	P36037	715 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	VPS51	P36116	164 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	ECM4	P36156	370 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	APE4	P38821	490 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	YHR177W	P38867	453 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	LYS1	P38998	373 aa	RIP-Chip data	4.63	□□□□□ -1.67	not detected
SFT2	YBL102W	RAD17	P48581	401 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	BIO3	P50277	480 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	SWS2	P53937	143 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	SPR6	Q01684	191 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	RRP40	Q08285	240 aa	Known RBP	4.63	□□□□□ -1.67
SFT2	YBL102W	YOL107W	Q12239	342 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	YOR214C	Q12282	236 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	YPR064W	Q12492	139 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	MSB2	P32334	1306 aa		4.63	□□□□□ -1.67
SFT2	YBL102W	PET9	P18239	318 aa	Known RBP	4.62	□□□□□ -1.67
SFT2	YBL102W	RPB5	P20434	215 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	YCR007C	P25354	239 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	YBR285W	P38354	144 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	GOS1	P38736	223 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	PEX18	P38855	283 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	VPS52	P39904	641 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	ISC1	P40015	477 aa	Known RBP	4.62	□□□□□ -1.67
SFT2	YBL102W	RTT105	P40063	208 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	DDI1	P40087	428 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	GCN20	P43535	752 aa	Known RBP	4.62	□□□□□ -1.67
SFT2	YBL102W	APS3	P47064	194 aa		4.62	□□□□□ -1.67
SFT2	YBL102W	PRM8	P53174	237 aa		4.62	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 23.2 ms