RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA1	YAL005C	SSY5	P47002	699 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	SAM37	P50110	327 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	BRR6	P53062	197 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	YGR126W	P53274	230 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	SUR7	P54003	302 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	SCS7	Q03529	384 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	TAZ1	Q06510	381 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	YDL176W	Q12027	708 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	GAS1	P22146	559 aa	Known RBP	12.01	□□□□□ -0.49
SSA1	YAL005C	RPS5	P26783	225 aa	Known RBP	12.01	□□□□□ -0.49
SSA1	YAL005C	AFR1	P33304	620 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	OGG1	P53397	376 aa	Predicted RBP	12.01	□□□□□ -0.49
SSA1	YAL005C	SCM3	Q12334	223 aa		12.01	□□□□□ -0.49
SSA1	YAL005C	ATS1	P31386	333 aa		12	□□□□□ -0.49
SSA1	YAL005C	YKR015C	P36111	568 aa		12	□□□□□ -0.49
SSA1	YAL005C	MAL32	P38158	584 aa		12	□□□□□ -0.49
SSA1	YAL005C	RPS26A	P39938	119 aa	Known RBP	12	□□□□□ -0.49
SSA1	YAL005C	RPS26B	P39939	119 aa	Known RBP	12	□□□□□ -0.49
SSA1	YAL005C	NIT2	P47016	307 aa		12	□□□□□ -0.49
SSA1	YAL005C	YGR066C	P53242	292 aa		12	□□□□□ -0.49
SSA1	YAL005C	MAL12	P53341	584 aa		12	□□□□□ -0.49
SSA1	YAL005C	FMP45	Q07651	309 aa		12	□□□□□ -0.49
SSA1	YAL005C	RBD2	Q12270	262 aa		12	□□□□□ -0.49
SSA1	YAL005C	FLO9	P39712	1322 aa		12	□□□□□ -0.49
SSA1	YAL005C	RPL7A	P05737	244 aa	Known RBP	11.99	□□□□□ -0.49
SSA1	YAL005C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	11.99	□□□□□ -0.49	not detected
SSA1	YAL005C	NFS1	P25374	497 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	SUR1	P33300	382 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	SHE1	P38200	338 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	STS1	P38637	319 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	YEL057C	P39983	233 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	NTA1	P40354	457 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	PRY1	P47032	299 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	MNT4	P53745	580 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	YPL039W	Q03080	316 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	RPL7B	Q12213	244 aa	Known RBP	11.99	□□□□□ -0.49
SSA1	YAL005C	PEP4	P07267	405 aa	Known RBP	11.99	□□□□□ -0.49
SSA1	YAL005C	ALG14	P38242	237 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	MAK3	Q03503	176 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	NEJ1	Q06148	342 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	YLR173W	Q06247	608 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	BLM10	P43583	2143 aa		11.99	□□□□□ -0.49
SSA1	YAL005C	YAL064W-B	O13512	126 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	CUP1-1	P0CX80	61 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	CUP1-2	P0CX81	61 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	DOA4	P32571	926 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	RFC4	P40339	323 aa	Known RBP	11.98	□□□□□ -0.49
SSA1	YAL005C	LYS5	P50113	272 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	YPR147C	Q06522	304 aa	Known RBP	11.98	□□□□□ -0.49
SSA1	YAL005C	KIN28	P06242	306 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	MDH2	P22133	377 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	FPS1	P23900	669 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	VPS17	P32913	551 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	COS9	P36034	407 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	HIS6	P40545	261 aa		11.98	□□□□□ -0.49
SSA1	YAL005C	LSO2	Q3E772	92 aa	Known RBP	11.98	□□□□□ -0.49
SSA1	YAL005C	TAL1	P15019	335 aa	Known RBP	11.97	□□□□□ -0.49
SSA1	YAL005C	CHK1	P38147	527 aa		11.97	□□□□□ -0.49
SSA1	YAL005C	YMR315W	Q04869	349 aa	Known RBP	11.97	□□□□□ -0.49
SSA1	YAL005C	FRE5	Q08908	694 aa		11.97	□□□□□ -0.49
SSA1	YAL005C	STE12	P13574	688 aa		11.96	□□□□□ -0.49
SSA1	YAL005C	PPA2	P28239	310 aa		11.96	□□□□□ -0.49
SSA1	YAL005C	ARO7	P32178	256 aa		11.96	□□□□□ -0.49
SSA1	YAL005C	SFH5	P47008	294 aa		11.96	□□□□□ -0.49
SSA1	YAL005C	AGE1	Q04412	482 aa		11.96	□□□□□ -0.49
SSA1	YAL005C	THP3	Q12049	470 aa	Known RBP	11.96	□□□□□ -0.49
SSA1	YAL005C	PDX1	P16451	410 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	RPB10	P22139	70 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	BUR6	P40096	142 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	IRC5	P43610	853 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	RBL2	P48606	106 aa	Known RBP	11.96	□□□□□ -0.5
SSA1	YAL005C	YLR346C	Q06139	101 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	GRE1	Q08969	168 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	Q0144	Q9ZZW2	109 aa		11.96	□□□□□ -0.5
SSA1	YAL005C	SEC16	P48415	2195 aa	Known RBP	11.95	□□□□□ -0.5
SSA1	YAL005C	TRA1	P38811	3744 aa		11.95	□□□□□ -0.5
SSA1	YAL005C	CPR2	P23285	205 aa		11.95	□□□□□ -0.5
SSA1	YAL005C	CHS7	P38843	316 aa		11.95	□□□□□ -0.5
SSA1	YAL005C	MLH1	P38920	769 aa		11.95	□□□□□ -0.5
SSA1	YAL005C	PHO90	P39535	881 aa		11.95	□□□□□ -0.5
SSA1	YAL005C	VBA4	Q04602	768 aa	Known RBP	11.95	□□□□□ -0.5
SSA1	YAL005C	HMS1	Q12398	434 aa		11.95	□□□□□ -0.5
SSA1	YAL005C	LOC1	P43586	204 aa	Predicted RBP	11.94	□□□□□ -0.5
SSA1	YAL005C	BPL1	P48445	690 aa	Predicted RBP	11.94	□□□□□ -0.5
SSA1	YAL005C	NFT1	P0CE68	1218 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	SEC12	P11655	471 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	VBA2	P38358	474 aa	Known RBP	11.94	□□□□□ -0.5
SSA1	YAL005C	YIL165C	P40446	119 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	FMC1	P40491	155 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	PPT1	P53043	513 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	SCW11	P53189	542 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	VOA1	P53262	265 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	NUP116	Q02630	1113 aa		11.94	□□□□□ -0.5
SSA1	YAL005C	DBF20	P32328	564 aa		11.93	□□□□□ -0.5
SSA1	YAL005C	RSM24	Q03976	319 aa		11.93	□□□□□ -0.5
SSA1	YAL005C	SPR28	Q04921	423 aa		11.93	□□□□□ -0.5
SSA1	YAL005C	OPI3	P05375	206 aa		11.92	□□□□□ -0.5
SSA1	YAL005C	UTR1	P21373	530 aa		11.92	□□□□□ -0.5
SSA1	YAL005C	FUN19	P28003	413 aa	Predicted RBP	11.92	□□□□□ -0.5
SSA1	YAL005C	ECT1	P33412	323 aa		11.92	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 49.3 ms