RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 PPP1R18Q6NYC8 613 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 KIAA1586Q9HCI6 787 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 ABCB11O95342 1321 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 RNF103-CHMP3A0A140T963 221 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 TRIM49P0CI25 452 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 TRIM49CP0CI26 452 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 ORC2Q13416 577 aaPredicted RBP19.66■□□□□ 0.74
SCARB2-213ENST00000638680 TSGA10IPQ3SY00 556 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 TEDDM1Q5T9Z0 273 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 KRT27Q7Z3Y8 459 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 RHOT1Q8IXI2 618 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 ARL8AQ96BM9 186 aa19.66■□□□□ 0.74
SCARB2-213ENST00000638680 MRPL40Q9NQ50 206 aaKnown RBP19.66■□□□□ 0.74
SCARB2-213ENST00000638680 TDP2O95551 362 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ANGPTL8Q6UXH0 198 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 CCNI2Q6ZMN8 369 aaPredicted RBP19.65■□□□□ 0.74
SCARB2-213ENST00000638680 DCP1AQ9NPI6 582 aaPredicted RBP19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ARL2BPQ9Y2Y0 163 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 GH2P01242 217 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 MYBL1P10243 752 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 PAPOLAP51003 745 aaKnown RBP19.65■□□□□ 0.74
SCARB2-213ENST00000638680 FOXP4Q8IVH2 680 aaPredicted RBP19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ARHGAP18Q8N392 663 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ARMC2Q8NEN0 867 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 PARD3BQ8TEW8 1205 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 FAM20AQ96MK3 541 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 KCNB1Q14721 858 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 SMAD1Q15797 465 aaKnown RBP19.65■□□□□ 0.74
SCARB2-213ENST00000638680 SAMD9LQ8IVG5 1584 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 PHF20L1A8MW92 1017 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 RANBP1P43487 201 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ROR1Q01973 937 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ALX1Q15699 326 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ABI1Q8IZP0 508 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 ALKBH8Q96BT7 664 aaKnown RBP19.65■□□□□ 0.74
SCARB2-213ENST00000638680 CEP95Q96GE4 821 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 TRIM51Q9BSJ1 452 aa19.65■□□□□ 0.74
SCARB2-213ENST00000638680 SRP68Q9UHB9 627 aaKnown RBP19.64■□□□□ 0.74
SCARB2-213ENST00000638680 DENND3A2RUS2 1198 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 GSG1L2A8MUP6 293 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 AGTP01019 485 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 EFTUD2Q15029 972 aaKnown RBP eCLIP19.64■□□□□ 0.74
SCARB2-213ENST00000638680 LRIG3Q6UXM1 1119 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 MTA3Q9BTC8 594 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 NBPF3Q9H094 633 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 SNX5Q9Y5X3 404 aa19.64■□□□□ 0.74
SCARB2-213ENST00000638680 ANKARQ7Z5J8 1434 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 LOC102724159A0A0B4J2E5 919 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 KIF1CO43896 1103 aaKnown RBP19.64■□□□□ 0.73
SCARB2-213ENST00000638680 CCDC22O60826 627 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 EXOSC10Q01780 885 aaKnown RBP19.64■□□□□ 0.73
SCARB2-213ENST00000638680 BYSLQ13895 437 aaKnown RBP19.64■□□□□ 0.73
SCARB2-213ENST00000638680 PWP2Q15269 919 aaKnown RBP19.64■□□□□ 0.73
SCARB2-213ENST00000638680 SGMS1Q86VZ5 419 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.64■□□□□ 0.73
SCARB2-213ENST00000638680 TRAF3IP3Q9Y228 551 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 PFASO15067 1338 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 LAMC1P11047 1609 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 SMARCA1P28370 1054 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 CCNA1P78396 465 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 SCG3Q8WXD2 468 aaKnown RBP19.64■□□□□ 0.73
SCARB2-213ENST00000638680 HPS3Q969F9 1004 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 OSBPP22059 807 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 NR1I3Q14994 352 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 SYNE4Q8N205 404 aa19.64■□□□□ 0.73
SCARB2-213ENST00000638680 SSTR3P32745 418 aaPredicted RBP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 PGM1P36871 562 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ARSEP51690 589 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 SPDYE1Q8NFV5 336 aaPredicted RBP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 AGPAT1Q99943 283 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ARHGAP10A1A4S6 786 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ZSCAN20P17040 1043 aaPredicted RBP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 FXR1P51114 621 aaKnown RBP eCLIP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 CACNB3P54284 484 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 CUL3Q13618 768 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 KIAA1755Q5JYT7 1200 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ANKMY2Q8IV38 441 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 FSD1LQ9BXM9 530 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 DDX56Q9NY93 547 aaKnown RBP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ITIH6Q6UXX5 1313 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 FRMD5Q7Z6J6 570 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 MCPH1Q8NEM0 835 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 GCOM2Q9BZD3 368 aaPredicted RBP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 SLC9A2Q9UBY0 812 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 M0QYV0 167 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 RAD17O75943 681 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 ERFP50548 548 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 PSMC1P62191 440 aaKnown RBP19.63■□□□□ 0.73
SCARB2-213ENST00000638680 POU5F1BQ06416 359 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 STAT4Q14765 748 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 FRA10AC1Q70Z53 315 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 CCDC90BQ9GZT6 254 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 TRABDQ9H4I3 376 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 EMSYQ7Z589 1322 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 DPYDQ12882 1025 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 SEMA3FQ13275 785 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 OR2W6PQ8NHA6 318 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 RAPGEF5Q92565 580 aa19.63■□□□□ 0.73
SCARB2-213ENST00000638680 AP5M1Q9H0R1 490 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms