RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 MMGT1Q8N4V1 131 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 FAM192AQ9GZU8 254 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 UNC45AQ9H3U1 944 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 SARS2Q9NP81 518 aaKnown RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 LSM7Q9UK45 103 aaKnown RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 ARIH1Q9Y4X5 557 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 CFAP99D6REC4 459 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 IL6P05231 212 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 CLK1P49759 484 aaKnown RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 AMPD2Q01433 879 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 CAV1Q03135 178 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 DNM1Q05193 864 aaKnown RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 DCAF4L1Q3SXM0 396 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 BTNL9Q6UXG8 535 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 KIAA0408Q6ZU52 694 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 COMMD2Q86X83 199 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 TCP11Q8WWU5 503 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 STAMBPL1Q96FJ0 436 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 ELMO2Q96JJ3 720 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 VPS54Q9P1Q0 977 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 A0A087X0T9 212 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 NFIBO00712 420 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 PRODHO43272 600 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 CHGBP05060 677 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 RALAP11233 206 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 PPP3CCP48454 512 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 GNGT1P63211 74 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 PURAQ00577 322 aaKnown RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 ADCY2Q08462 1091 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 SPARCL1Q14515 664 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 CCDC103Q8IW40 242 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 CASP10Q92851 521 aa6.36□□□□□ -1.39
SCN1A-212ENST00000636194 SOS1Q07889 1333 aaPredicted RBP6.36□□□□□ -1.39
SCN1A-212ENST00000636194 RGS10O43665 173 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 PLS3P13797 630 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 GRK3P35626 688 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 EXOC3L4Q17RC7 722 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 NDUFAF6Q330K2 333 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 AKIRIN2Q53H80 203 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 ARMCX4Q5H9R4 360 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 DSTYKQ6XUX3 929 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TERB1Q8NA31 727 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 OR8K1Q8NGG5 319 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 USP13Q92995 863 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 FMO2Q99518 471 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 AVENQ9NQS1 362 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 SCN3BQ9NY72 215 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 COMMD9Q9P000 198 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 MROH5Q6ZUA9 1318 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 IRS4O14654 1257 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TRAPPC3O43617 180 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 ERVK-10P10266 1014 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 IL2RBP14784 551 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 ARHGEF7Q14155 803 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 ANO1Q5XXA6 986 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TRIM65Q6PJ69 517 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 KSR1Q8IVT5 923 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TTLL11Q8NHH1 800 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TSPAN17Q96FV3 270 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 STOML1Q9UBI4 398 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 RPS6KB2Q9UBS0 482 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 MAD2L2Q9UI95 211 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 PHF8Q9UPP1 1060 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 LZTS1Q9Y250 596 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 PPIP5K1Q6PFW1 1433 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 FGD6Q6ZV73 1430 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TEX46H3BTG2 121 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 OAS2P29728 719 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 SERPINB4P48594 390 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TMED10P49755 219 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 GRSF1Q12849 480 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 CNTN1Q12860 1018 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 C1DQ13901 141 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 PDCD4Q53EL6 469 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 USHBP1Q8N6Y0 703 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 C1orf131Q8NDD1 294 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 MAGOHBQ96A72 148 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 MAGED2Q9UNF1 606 aaPredicted RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 VPS9D1Q9Y2B5 631 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 RNF103O00237 685 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 FNTAP49354 379 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 PEX5P50542 639 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 FCHO2Q0JRZ9 810 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 BBS9Q3SYG4 887 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 C7orf31Q8N865 590 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 TMX3Q96JJ7 454 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 SLC12A5Q9H2X9 1139 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 VTI1BQ9UEU0 232 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 PCP11498 1178 aaKnown RBP6.35□□□□□ -1.39
SCN1A-212ENST00000636194 HMOX2P30519 316 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 BAG6P46379 1132 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 MYBPC2Q14324 1141 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 KYAT1Q16773 422 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 CCDC157Q569K6 752 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 BTBD8Q5XKL5 378 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 ABRAXAS1Q6UWZ7 409 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 HAUS6Q7Z4H7 955 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 ADCK2Q7Z695 626 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 STAG2Q8N3U4 1231 aa6.35□□□□□ -1.39
SCN1A-212ENST00000636194 C19orf18Q8NEA5 215 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms