RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 TMEM134Q9H6X4 195 aa8.6□□□□□ -1.03
NR1I3-235ENST00000628566 FAM105AQ9NUU6 356 aa8.6□□□□□ -1.03
NR1I3-235ENST00000628566 SEL1LQ9UBV2 794 aa8.6□□□□□ -1.03
NR1I3-235ENST00000628566 USP25Q9UHP3 1055 aa8.6□□□□□ -1.03
NR1I3-235ENST00000628566 PCDHA7Q9UN72 937 aa8.6□□□□□ -1.03
NR1I3-235ENST00000628566 TET1Q8NFU7 2136 aa8.6□□□□□ -1.03
NR1I3-235ENST00000628566 COL4A6Q14031 1691 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 TBKBP1A7MCY6 615 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 ACKR2O00590 384 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 MGEA5O60502 916 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 TSPAN1O60635 241 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 ZNF623O75123 536 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 NR1I2O75469 434 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 RB1P06400 928 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 ITGA4P13612 1032 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 GAP43P17677 238 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 NPTX2P47972 431 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 RAD51AP2Q09MP3 1159 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 ALCAMQ13740 583 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 PTPROQ16827 1216 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 DCAF4L1Q3SXM0 396 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 USP49Q70CQ1 688 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 RTN4RL1Q86UN2 441 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 FAM178BQ8IXR5 827 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 CCDC65Q8IXS2 484 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 LRRC43Q8N309 656 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 SP7Q8TDD2 431 aaPredicted RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 LINC01599Q8WXQ3 324 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 ARNTL2Q8WYA1 636 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 CCDC47Q96A33 483 aaKnown RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 DHX58Q96C10 678 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 BICD1Q96G01 975 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 FAM161BQ96MY7 647 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 REEP2Q9BRK0 252 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 NTPCRQ9BSD7 190 aaKnown RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 TCHPQ9BT92 498 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 PANK2Q9BZ23 570 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 FZD8Q9H461 694 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 BLOC1S4Q9NUP1 217 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 CHMP5Q9NZZ3 219 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 KANSL3Q9P2N6 904 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 YBX2Q9Y2T7 364 aaKnown RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 ZDHHC9Q9Y397 364 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 PCDHB2Q9Y5E7 798 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 PCDHB12Q9Y5F1 795 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 TRIOBPQ9H2D6 2365 aa8.59□□□□□ -1.03
NR1I3-235ENST00000628566 RANBP2P49792 3224 aaKnown RBP8.59□□□□□ -1.03
NR1I3-235ENST00000628566 A0A1B0GUA9 196 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 A0A1W2PQ27 194 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 A0A1W2PQ64 194 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 A0A1W2PQD8 194 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 LINC01553A4QN01 128 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 K7ENM7 598 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 SLC16A4O15374 487 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 POLR2DO15514 142 aaKnown RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 TRAK2O60296 914 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 MYL1P05976 194 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 MAPTP10636 758 aaKnown RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 IDEP14735 1019 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 MYOGP15173 224 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 FOSL2P15408 326 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 ARF4P18085 180 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 LAG3P18627 525 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 CMA1P23946 247 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 CTNNB1P35222 781 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 PPM1AP35813 382 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 MATR3P43243 847 aaKnown RBP eCLIP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 ERVK-21P61565 698 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 TAP1Q03518 808 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 RNASELQ05823 741 aaKnown RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 GIT2Q14161 759 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 PAN2Q504Q3 1202 aaKnown RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 NAALADL2Q58DX5 795 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 ATF7IP2Q5U623 682 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 RESP18Q5W5W9 173 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 SHC4Q6S5L8 630 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 TMCO2Q7Z6W1 182 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 FBXO22Q8NEZ5 403 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 BSNDQ8WZ55 320 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 DDX12PQ92771 950 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 ZNF689Q96CS4 500 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 CPB2Q96IY4 423 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 FAM193BQ96PV7 902 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 RPS6KC1Q96S38 1066 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 C11orf84Q9BUA3 381 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 MINDY3Q9H8M7 445 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 RSAD1Q9HA92 442 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 TOPORSQ9NS56 1045 aaPredicted RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 MTMR10Q9NXD2 777 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 STK39Q9UEW8 545 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 HOOK1Q9UJC3 728 aaKnown RBP8.58□□□□□ -1.04
NR1I3-235ENST00000628566 KCNH3Q9ULD8 1083 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 EXOC7Q9UPT5 735 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 ZMYM2Q9UBW7 1377 aa8.58□□□□□ -1.04
NR1I3-235ENST00000628566 SFI1A8K8P3 1242 aa8.57□□□□□ -1.04
NR1I3-235ENST00000628566 NPTXRO95502 500 aa8.57□□□□□ -1.04
NR1I3-235ENST00000628566 FGFR1P11362 822 aa8.57□□□□□ -1.04
NR1I3-235ENST00000628566 HOXA11P31270 313 aaPredicted RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms