RNA–Protein interactions for RNA: ENST00000628509.1

FOXCUT-201, FOXC1 upstream transcript, humanhuman

TSL 3 BASIC

Gene FOXCUT, Length 333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXCUT-201ENST00000628509 SESTD1Q86VW0 696 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 PPFIBP1Q86W92 1011 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 XXYLT1Q8NBI6 393 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 RNF149Q8NC42 400 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 NLRP7Q8WX94 980 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 POMGNT1Q8WZA1 660 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 HPS3Q969F9 1004 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 PPP1R9BQ96SB3 815 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 CEP89Q96ST8 783 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 SH2D3AQ9BRG2 576 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 ADPGKQ9BRR6 497 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 STRA6Q9BX79 667 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 GPRC5CQ9NQ84 441 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 AGPAT3Q9NRZ7 376 aa11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 SAMSN1Q9NSI8 373 aaKnown RBP11.1□□□□□ -0.63
FOXCUT-201ENST00000628509 A0A1B0GTH6 734 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 A0A1W2PQC6 194 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 INO80B-WBP1J3KQ70 363 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 PIGRP01833 764 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 SRGAP2CP0DJJ0 459 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 SFPQP23246 707 aaKnown RBP eCLIP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 AXLP30530 894 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 CTCFP49711 727 aaPredicted RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 COPB1P53618 953 aaKnown RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 POU5F1Q01860 360 aaKnown RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 ZC2HC1CQ53FD0 456 aaPredicted RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 CDCA2Q69YH5 1023 aaPredicted RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 CTU1Q7Z7A3 348 aaKnown RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 ZC3H3Q8IXZ2 948 aaKnown RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 CCDC155Q8N6L0 562 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 CCDC150Q8NCX0 1101 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 KLHDC9Q8NEP7 349 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 TRPV1Q8NER1 839 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 ZNF397Q8NF99 534 aaPredicted RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 FIZ1Q96SL8 496 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 DUSP9Q99956 384 aaKnown RBP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 TCHPQ9BT92 498 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 MROH7Q68CQ1 1323 aa11.09□□□□□ -0.63
FOXCUT-201ENST00000628509 LGALS16A8MUM7 142 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 ZBTB42B2RXF5 422 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 ACKR2O00590 384 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 CLDN3O15551 220 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 ADAMTS4O75173 837 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 TOM1L1O75674 476 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PGK1P00558 417 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PRKCBP05771 671 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 ASGR1P07306 291 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 CCND3P30281 292 aaPredicted RBP11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 TIE1P35590 1138 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 CASP5P51878 434 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 AP3M2P53677 418 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PTENP60484 403 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 BEX3Q00994 111 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 UBXN1Q04323 297 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PRPF4BQ13523 1007 aaKnown RBP11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 CAPSQ13938 189 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 KRT31Q15323 416 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 KCNA10Q16322 511 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 FAM187BQ17R55 369 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 VWA3BQ502W6 1294 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 FAM47CQ5HY64 1035 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 SPECC1LQ69YQ0 1117 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 HACE1Q8IYU2 909 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 GPD1LQ8N335 351 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PLCD3Q8N3E9 789 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 LRRC71Q8N4P6 559 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 LMBR1Q8WVP7 490 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PDLIM2Q96JY6 352 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 FAM81BQ96LP2 452 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PCMTD1Q96MG8 357 aaPredicted RBP11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 XPO4Q9C0E2 1151 aaKnown RBP11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 NUCKS1Q9H1E3 243 aaKnown RBP11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 SETD4Q9NVD3 440 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 GTF2IRD1Q9UHL9 959 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 PTCH2Q9Y6C5 1203 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 ITIH6Q6UXX5 1313 aa11.08□□□□□ -0.64
FOXCUT-201ENST00000628509 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 ZNF233A6NK53 670 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 DNM1LO00429 736 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 P4HA2O15460 535 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 ADCY6O43306 1168 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 CLCN3P51790 818 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 ACLYP53396 1101 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 PMS1P54277 932 aaKnown RBP11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 TCERG1LQ5VWI1 586 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 FBXO46Q6PJ61 603 aaPredicted RBP11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 CXCL17Q6UXB2 119 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 LRRC55Q6ZSA7 311 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 CNGA4Q8IV77 575 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 ASAP3Q8TDY4 903 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 KAT2BQ92831 832 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 FNBP1Q96RU3 617 aa11.07□□□□□ -0.64
FOXCUT-201ENST00000628509 NDST4Q9H3R1 872 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms