RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CSPP1Q1MSJ5 1256 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 CLLU1OSQ5K130 101 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 MICALL1Q8N3F8 863 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 LINC00301Q8NCQ3 95 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 HELQQ8TDG4 1101 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 MRPL38Q96DV4 380 aaKnown RBP18.49■□□□□ 0.55
UBE3D-208ENST00000626828 CPB2Q96IY4 423 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 EPSTI1Q96J88 318 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 RUSC1Q9BVN2 902 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 LMAN2LQ9H0V9 348 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 UBN1Q9NPG3 1134 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 PLAGL2Q9UPG8 496 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 RBM19Q9Y4C8 960 aaKnown RBP18.49■□□□□ 0.55
UBE3D-208ENST00000626828 COL6A3P12111 3177 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 CDH23Q9H251 3354 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 CCDC169A6NNP5 214 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 K7ERI5 159 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 ACKR2O00590 384 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 SPTLC2O15270 562 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 NCLP19338 710 aaKnown RBP18.48■□□□□ 0.55
UBE3D-208ENST00000626828 TXLNAP40222 546 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 PEX3P56589 373 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 KARSQ15046 597 aaKnown RBP18.48■□□□□ 0.55
UBE3D-208ENST00000626828 SPECC1Q5M775 1068 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 GLB1LQ6UWU2 654 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 LRRC55Q6ZSA7 311 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 DAW1Q8N136 415 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 LPPQ93052 612 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 CLIC6Q96NY7 704 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 NTPCRQ9BSD7 190 aaKnown RBP18.48■□□□□ 0.55
UBE3D-208ENST00000626828 MRPL9Q9BYD2 267 aaKnown RBP18.48■□□□□ 0.55
UBE3D-208ENST00000626828 CWH43Q9H720 699 aa18.48■□□□□ 0.55
UBE3D-208ENST00000626828 PPP6R2O75170 966 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 OFD1O75665 1012 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 YEATS4O95619 227 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 ITGA4P13612 1032 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 LAG3P18627 525 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 PLCG1P19174 1290 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 NPTX2P47972 431 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 SMTNP53814 917 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-208ENST00000626828 PRPF4BQ13523 1007 aaKnown RBP18.47■□□□□ 0.55
UBE3D-208ENST00000626828 LONRF3Q496Y0 759 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 SLC27A1Q6PCB7 646 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 USP49Q70CQ1 688 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 HACE1Q8IYU2 909 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 LRRC43Q8N309 656 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 KLHL23Q8NBE8 558 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 SPPL3Q8TCT6 385 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 RAD54LQ92698 747 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 TRIM6Q9C030 488 aaPredicted RBP18.47■□□□□ 0.55
UBE3D-208ENST00000626828 TMEM134Q9H6X4 195 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 BLOC1S4Q9NUP1 217 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 KANSL3Q9P2N6 904 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 CFAP45Q9UL16 551 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 MYH11P35749 1972 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 PHLPP2Q6ZVD8 1323 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 CNTNAP2Q9UHC6 1331 aa18.47■□□□□ 0.55
UBE3D-208ENST00000626828 CARNS1A5YM72 827 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 SFI1A8K8P3 1242 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 GRM6O15303 877 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 B4GALT5O43286 388 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 ITGB1P05556 798 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 PRKCBP05771 671 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 MAPK7Q13164 816 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 DHX8Q14562 1220 aaKnown RBP18.46■□□□□ 0.55
UBE3D-208ENST00000626828 MCM6Q14566 821 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 TMEM132AQ24JP5 1023 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 ARSHQ5FYA8 562 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 NOMO2Q5JPE7 1267 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 RRAGBQ5VZM2 374 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 AGMOQ6ZNB7 445 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 COLGALT1Q8NBJ5 622 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 SMG8Q8ND04 991 aaKnown RBP18.46■□□□□ 0.55
UBE3D-208ENST00000626828 SPIRE2Q8WWL2 714 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 SYMPKQ92797 1274 aaKnown RBP18.46■□□□□ 0.55
UBE3D-208ENST00000626828 EIF2AQ9BY44 585 aaKnown RBP18.46■□□□□ 0.55
UBE3D-208ENST00000626828 CCDC113Q9H0I3 377 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 ALG13Q9NP73 1137 aaKnown RBP18.46■□□□□ 0.55
UBE3D-208ENST00000626828 KMT5AQ9NQR1 393 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 IPPQ9Y573 584 aa18.46■□□□□ 0.55
UBE3D-208ENST00000626828 N4BP3O15049 544 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 PLS3P13797 630 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 LIG1P18858 919 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 ALDH7A1P49419 539 aaKnown RBP18.45■□□□□ 0.54
UBE3D-208ENST00000626828 RAD51AP2Q09MP3 1159 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 PKP1Q13835 747 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 KCNT2Q6UVM3 1135 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 GPBP1Q86WP2 473 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 URGCPQ8TCY9 931 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 LARP4BQ92615 738 aaKnown RBP18.45■□□□□ 0.54
UBE3D-208ENST00000626828 ZNF558Q96NG5 402 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 RSAD1Q9HA92 442 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 LARSQ9P2J5 1176 aaKnown RBP18.45■□□□□ 0.54
UBE3D-208ENST00000626828 STK17AQ9UEE5 414 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 PUF60Q9UHX1 559 aaKnown RBP18.45■□□□□ 0.54
UBE3D-208ENST00000626828 ODF2LQ9ULJ1 636 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 BRWD1Q9NSI6 2320 aa18.45■□□□□ 0.54
UBE3D-208ENST00000626828 MEIS3P2A8K0S8 358 aa18.44■□□□□ 0.54
UBE3D-208ENST00000626828 NPTXRO95502 500 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms