RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 C1QTNF3-AMACRE9PGA6 284 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 RFPL1O75677 317 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 PLATP00750 562 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 CT47B1P0C2W7 299 aaPredicted RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 STAT5BP51692 787 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 ADKP55263 362 aaKnown RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 CDK17Q00537 523 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 MALLQ13021 153 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 NFYCQ13952 458 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 PCBP2Q15366 365 aaKnown RBP eCLIP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 NFE2Q16621 373 aaPredicted RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 GAGE13Q4V321 117 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 AGBL4Q5VU57 503 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 TAS1R1Q7RTX1 841 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 CLEC14AQ86T13 490 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 CPA6Q8N4T0 437 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 TTC9BQ8N6N2 239 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 MBD6Q96DN6 1003 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 HOOK2Q96ED9 719 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 SOX7Q9BT81 388 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 CSRNP2Q9H175 543 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 SLC6A15Q9H2J7 730 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 C14orf93Q9H972 538 aaKnown RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 DNAI1Q9UI46 699 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 FAM184BQ9ULE4 1060 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 PNMA8BQ9ULN7 279 aaPredicted RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 LUC7L2Q9Y383 392 aaKnown RBP5.54□□□□□ -1.52
CDKL5-207ENST00000624700 EID1Q9Y6B2 187 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 SLC4A7Q9Y6M7 1214 aa5.54□□□□□ -1.52
CDKL5-207ENST00000624700 RPTORQ8N122 1335 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 A0A1W2PR48 441 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 FZD9O00144 591 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 MTSS1O43312 755 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 AKAP10O43572 662 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 AKAP8O43823 692 aaKnown RBP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 B4GALT4O60513 344 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 GASTP01350 101 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 RPLP2P05387 115 aaKnown RBP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 JUNP05412 331 aaKnown RBP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 LTA4HP09960 611 aaKnown RBP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 AKAP5P24588 427 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 WASP42768 502 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 KIR2DL3P43628 341 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 WNT3AP56704 352 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 MGAT5Q09328 741 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 PIN1Q13526 163 aaPredicted RBP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 ADRM1Q16186 407 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 ARHGEF18Q6ZSZ5 1173 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 LARP4Q71RC2 724 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 GAREM2Q75VX8 874 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 GPR156Q8NFN8 814 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 JADE3Q92613 823 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 LOXL4Q96JB6 756 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 ADI1Q9BV57 179 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 C1QTNF3Q9BXJ4 246 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 SEC61A2Q9H9S3 476 aa5.53□□□□□ -1.52
CDKL5-207ENST00000624700 RBM12Q9NTZ6 932 aaKnown RBP5.53□□□□□ -1.52
CDKL5-207ENST00000624700 NRP1O14786 923 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 MATN3O15232 486 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 ARHGAP6O43182 974 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA12O60330 932 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 NDUFS2O75306 463 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 ABLIM3O94929 683 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 LY86O95711 162 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 GAAP10253 952 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 ZNF20P17024 532 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 ZSCAN20P17040 1043 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 CYP2C19P33261 490 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 RAB27AP51159 221 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 RAC3P60763 192 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PPP2CBP62714 309 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PPP2CAP67775 309 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 CD69Q07108 199 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PPP2R5AQ15172 486 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 TBC1D10BQ4KMP7 808 aaPredicted RBP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 CHPFQ8IZ52 775 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 MIER2Q8N344 545 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 TSPEARQ8WU66 669 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 TEKT5Q96M29 485 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 C8orf49Q96NF6 230 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 KRTAP3-1Q9BYR8 98 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 CDH19Q9H159 772 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PUF60Q9UHX1 559 aaKnown RBP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 MAGEL2Q9UJ55 1249 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 ZNF180Q9UJW8 692 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 G3BP2Q9UN86 482 aaKnown RBP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 THRAP3Q9Y2W1 955 aaKnown RBP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 NR2E1Q9Y466 385 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA9Q9Y5G4 932 aaKnown RBP5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA8Q9Y5G5 932 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA7Q9Y5G6 932 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA6Q9Y5G7 932 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA3Q9Y5H0 932 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 PCDHGA2Q9Y5H1 932 aa5.52□□□□□ -1.53
CDKL5-207ENST00000624700 GOLGA6CA6NDK9 693 aa5.51□□□□□ -1.53
CDKL5-207ENST00000624700 GOLGA6BA6NDN3 693 aa5.51□□□□□ -1.53
CDKL5-207ENST00000624700 FAM171A2A8MVW0 826 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms