RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 ATP8B4Q8TF62 1192 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.8□□□□□ -1.8
SMC5-204ENST00000618375 CYFIP2Q96F07 1278 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 C8orf48Q96LL4 319 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 TCF12Q99081 682 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 PRPF18Q99633 342 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 HGH1Q9BTY7 390 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SEMA4AQ9H3S1 761 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 EPB41L1Q9H4G0 881 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 C12orf10Q9HB07 376 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 PIDD1Q9HB75 910 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 GOLGA2P5Q9HBQ8 144 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 LGR6Q9HBX8 967 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KRT82Q9NSB4 513 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 TYW1Q9NV66 732 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 ATAD3AQ9NVI7 634 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 FAIMQ9NVQ4 179 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 RHBDL2Q9NX52 303 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 EURLQ9NYK6 297 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 MAP3K20Q9NYL2 800 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 CTTNBP2NLQ9P2B4 639 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 CFDP1Q9UEE9 299 aaPredicted RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 STAP2Q9UGK3 403 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 BAIAP2L1Q9UHR4 511 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 XPO7Q9UIA9 1087 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 SCOCQ9UIL1 159 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 MTUS1Q9ULD2 1270 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 FAM184BQ9ULE4 1060 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 PPP1R9AQ9ULJ8 1098 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 RPL26L1Q9UNX3 145 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 DIS3Q9Y2L1 958 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 PPP2R2CQ9Y2T4 447 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 USP16Q9Y5T5 823 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SNX9Q9Y5X1 595 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 SETD1AO15047 1707 aaKnown RBP3.8□□□□□ -1.8
SMC5-204ENST00000618375 MAST1Q9Y2H9 1570 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 KIAA0586Q9BVV6 1533 aa3.8□□□□□ -1.8
SMC5-204ENST00000618375 ABCC5O15440 1437 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 PTCH1Q13635 1447 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GAKO14976 1311 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 KAT6BQ8WYB5 2073 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 A0A088AWK7 358 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 IQANK1A0A1B0GTG1 560 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 LINC00854A0A1B0GVQ3 168 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 DNM1LO00429 736 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 IFIT3O14879 490 aaKnown RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 PPIP5K2O43314 1243 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 FIBPO43427 364 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 STX6O43752 255 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 B4GALT4O60513 344 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 SNX2O60749 519 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CPNE3O75131 537 aaKnown RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 HIP1RO75146 1068 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 ADAMTS4O75173 837 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 TACC1O75410 805 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 STAMBPO95630 424 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 NFICP08651 508 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GSTT2P0CG29 244 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GSTT2BP0CG30 244 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GSPT1P15170 499 aaKnown RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 RXRAP19793 462 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CD9P21926 228 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 NFKBIAP25963 317 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 TNFRSF8P28908 595 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 PPP2R1AP30153 589 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GSTT1P30711 240 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CSTF2P33240 577 aaKnown RBP eCLIP3.79□□□□□ -1.8
SMC5-204ENST00000618375 ASPAP45381 313 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 PDE6CP51160 858 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GPC3P51654 580 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 USP14P54578 494 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GJA9P57773 515 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 GNG11P61952 73 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 LACTBP83111 547 aaPredicted RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 CYP27A1Q02318 531 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CYP4A11Q02928 519 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CKAP4Q07065 602 aaKnown RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 MAP3K12Q12852 859 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 ITGA9Q13797 1035 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 ITIH4Q14624 930 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 ME3Q16798 604 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 FAM209AQ5JX71 171 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CFAP58Q5T655 872 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 TWF2Q6IBS0 349 aaKnown RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 PHLDB3Q6NSJ2 640 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 HIBCHQ6NVY1 386 aaPredicted RBP3.79□□□□□ -1.8
SMC5-204ENST00000618375 CYP26C1Q6V0L0 522 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 RUFY4Q6ZNE9 571 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 BEND5Q7L4P6 421 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 ZAR1Q86SH2 424 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 BRSK2Q8IWQ3 736 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CD302Q8IX05 232 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CACNA2D3Q8IZS8 1091 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 SPARTQ8N0X7 666 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 NDUFAF2Q8N183 169 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CARNMT1Q8N4J0 409 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 CHCHD4Q8N4Q1 142 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 ARL6IP6Q8N6S5 226 aa3.79□□□□□ -1.8
SMC5-204ENST00000618375 MLKLQ8NB16 471 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms