RNA–Protein interactions for RNA: ENST00000617164.4

BARD1-212, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-212ENST00000617164 SDC4P31431 198 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 STX2P32856 288 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 MNAT1P51948 309 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 TPD52P55327 224 aaPredicted RBP13.09□□□□□ -0.31
BARD1-212ENST00000617164 ANKRD40Q6AI12 368 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 B4GALNT4Q76KP1 1039 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 PPP4R1Q8TF05 950 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 EIF3DO15371 548 aaKnown RBP eCLIP13.09□□□□□ -0.31
BARD1-212ENST00000617164 MSH4O15457 936 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 CIB2O75838 187 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 ZBED1O96006 694 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 DSG3P32926 999 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 DPYDQ12882 1025 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 NDUFAF2Q8N183 169 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 PPP2R3CQ969Q6 453 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 GDAP1L1Q96MZ0 367 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 PITPNM2Q9BZ72 1349 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 ITGA4P13612 1032 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 ADORA2BP29275 332 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 TFDP2Q14188 446 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 APOBEC3HQ6NTF7 200 aaKnown RBP13.09□□□□□ -0.31
BARD1-212ENST00000617164 EDEM3Q9BZQ6 932 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 IGSF9BQ9UPX0 1349 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 MYMKA6NI61 221 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 TJP3O95049 919 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 CD4P01730 458 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 TFRCP02786 760 aaKnown RBP13.09□□□□□ -0.31
BARD1-212ENST00000617164 EPHB1P54762 984 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 APBA1Q02410 837 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 SEC23AQ15436 765 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 SH2D3AQ9BRG2 576 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 C11orf70Q9BRQ4 267 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
BARD1-212ENST00000617164 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.09□□□□□ -0.31
BARD1-212ENST00000617164 ATF7IP2Q5U623 682 aa13.08□□□□□ -0.31
BARD1-212ENST00000617164 C1orf228Q6PIY5 440 aa13.08□□□□□ -0.31
BARD1-212ENST00000617164 ANKRD42Q8N9B4 389 aa13.08□□□□□ -0.31
BARD1-212ENST00000617164 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.31
BARD1-212ENST00000617164 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.31
BARD1-212ENST00000617164 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 S100BP04271 92 aaPredicted RBP13.08□□□□□ -0.32
BARD1-212ENST00000617164 INHBAP08476 426 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 MUTP22033 750 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 SREBF1P36956 1147 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 PSMC1P62191 440 aaKnown RBP13.08□□□□□ -0.32
BARD1-212ENST00000617164 BASP1P80723 227 aaKnown RBP13.08□□□□□ -0.32
BARD1-212ENST00000617164 RNF219Q5W0B1 726 aaPredicted RBP13.08□□□□□ -0.32
BARD1-212ENST00000617164 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.08□□□□□ -0.32
BARD1-212ENST00000617164 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 AGAP1Q9UPQ3 857 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 PDHXO00330 501 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 RABGGTAQ92696 567 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 C17orf75Q9HAS0 396 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.08□□□□□ -0.32
BARD1-212ENST00000617164 ADM5C9JUS6 153 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 GOLGA8KD6RF30 607 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 SART1O43290 800 aaKnown RBP13.08□□□□□ -0.32
BARD1-212ENST00000617164 PPFIA4O75335 1185 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 STILQ15468 1287 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 APPL2Q8NEU8 664 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 CFAP57Q96MR6 1250 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
BARD1-212ENST00000617164 F8W8V4 182 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 TADA2AO75478 443 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 ADSSL1Q8N142 457 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 TTC13Q8NBP0 860 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 SKA2Q8WVK7 121 aaPredicted RBP13.07□□□□□ -0.32
BARD1-212ENST00000617164 SPATC1LQ9H0A9 340 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 CPA4Q9UI42 421 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 NKRFO15226 690 aaKnown RBP eCLIP13.07□□□□□ -0.32
BARD1-212ENST00000617164 SOX5P35711 763 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 HERVK_113P62684 666 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 PDE1BQ01064 536 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 PPATQ06203 517 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 PPP6R3Q5H9R7 873 aaPredicted RBP13.07□□□□□ -0.32
BARD1-212ENST00000617164 PCNX4Q63HM2 1172 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 GLB1LQ6UWU2 654 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 DNERQ8NFT8 737 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 RRAGDQ9NQL2 400 aaPredicted RBP13.07□□□□□ -0.32
BARD1-212ENST00000617164 SIGLEC1Q9BZZ2 1709 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 RALAP11233 206 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 SAT1P21673 171 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 OAZ1P54368 228 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 THOC5Q13769 683 aaKnown RBP13.07□□□□□ -0.32
BARD1-212ENST00000617164 EDRF1Q3B7T1 1238 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 VGLL2Q8N8G2 317 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 CDCA5Q96FF9 252 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 RIOX1Q9H6W3 641 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 IP6K2Q9UHH9 426 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 RPLP2P05387 115 aaKnown RBP13.07□□□□□ -0.32
BARD1-212ENST00000617164 TROVE2P10155 538 aaKnown RBP eCLIP13.07□□□□□ -0.32
BARD1-212ENST00000617164 ACOT2P49753 483 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 TMEM62Q0P6H9 643 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 NOTUMQ6P988 496 aa13.07□□□□□ -0.32
BARD1-212ENST00000617164 LRRC71Q8N4P6 559 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms