RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 JAK3P52333 1124 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NCKAP1LP55160 1127 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CIAPIN1Q6FI81 312 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 LMBR1Q8WVP7 490 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NTPCRQ9BSD7 190 aaKnown RBP11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 C17orf75Q9HAS0 396 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 COL20A1Q9P218 1284 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 WDR90Q96KV7 1748 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KLRC1P26715 233 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 RTP1P59025 263 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 IFFO1Q0D2I5 559 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CCDC174Q6PII3 467 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 HS2ST1Q7LGA3 356 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SYTL5Q8TDW5 730 aaPredicted RBP11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CEP89Q96ST8 783 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SLC40A1Q9NP59 571 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 STIM2Q9P246 746 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SUCLA2Q9P2R7 463 aaPredicted RBP11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PLAAQ9Y263 795 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GRIN2DO15399 1336 aa11.75□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 STAM2O75886 525 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PLS3P13797 630 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 LMNB1P20700 586 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SOX5P35711 763 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CASP4P49662 377 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PSEN1P49768 467 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 RAPGEF1Q13905 1077 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 EMC10Q5UCC4 262 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 VPS36Q86VN1 386 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NLRP14Q86W24 1093 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FAM178BQ8IXR5 827 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MGARPQ8TDB4 240 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 HOOK2Q96ED9 719 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SH3GL2Q99962 352 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CCPG1Q9ULG6 757 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ENO4A6NNW6 628 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ELF1P32519 619 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CLUL1Q15846 466 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 INTS8Q75QN2 995 aaKnown RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SYCE1Q8N0S2 351 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 REPS2Q8NFH8 660 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SCFD2Q8WU76 684 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NOVA2Q9UNW9 492 aaKnown RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 STK38LQ9Y2H1 464 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FRMD4BQ9Y2L6 1034 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CD2APQ9Y5K6 639 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 F8VZ95 297 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PALMO75781 387 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 QARSP47897 775 aaKnown RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 RARRES1P49788 294 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ALS2CLQ60I27 953 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 TBC1D1Q86TI0 1168 aaPredicted RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SUGP1Q8IWZ8 645 aaKnown RBP11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 FAM167BQ9BTA0 163 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GCNT4Q9P109 453 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NFASCO94856 1347 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MYPNQ86TC9 1320 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MYH10P35580 1976 aa11.74□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GOLGA8KD6RF30 607 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 TMEM253P0C7T8 217 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NMT1P30419 496 aaKnown RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GCKP35557 465 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 EPHB4P54760 987 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KCNA1Q09470 495 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 BFSP1Q12934 665 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MYO1EQ12965 1108 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ITGB3BPQ13352 177 aaPredicted RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 NEDD9Q14511 834 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PGM5Q15124 567 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KIAA0753Q2KHM9 967 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GPRASP2Q96D09 838 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ACCSQ96QU6 501 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 LARSQ9P2J5 1176 aaKnown RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ADAMTS1Q9UHI8 967 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 COL11A1P12107 1806 aaPredicted RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ARHGEF35A5YM69 484 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CEP104O60308 925 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 HIP1RO75146 1068 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 CTNNA1P35221 906 aaKnown RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SLCO1A2P46721 670 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 KRT76Q01546 638 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MICALCLQ6ZW33 695 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 MIER3Q7Z3K6 550 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 SPIRE2Q8WWL2 714 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 AGBL1Q96MI9 1066 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 GLIS2Q9BZE0 524 aaPredicted RBP11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 APEX2Q9UBZ4 518 aa11.73□□□□□ -0.53
SENP3-EIF4A1-201ENST00000614237 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms