RNA–Protein interactions for RNA: ENST00000612548.4

CIT-219, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 1 (best) BASIC

Gene CIT, Length 1,799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-219ENST00000612548 ZNF830Q96NB3 372 aaPredicted RBP16.15■□□□□ 0.18
CIT-219ENST00000612548 MAP7D2Q96T17 732 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 MTG1Q9BT17 334 aaPredicted RBP16.15■□□□□ 0.18
CIT-219ENST00000612548 MKNK1Q9BUB5 465 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 C2orf40Q9H1Z8 148 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 METTL14Q9HCE5 456 aaKnown RBP16.15■□□□□ 0.18
CIT-219ENST00000612548 DDX20Q9UHI6 824 aaKnown RBP16.15■□□□□ 0.18
CIT-219ENST00000612548 GRK4P32298 578 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 C1QTNF8P60827 252 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 HIC1Q14526 733 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 HS1BP3Q53T59 392 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 RDH13Q8NBN7 331 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 POMGNT1Q8WZA1 660 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 TARS2Q9BW92 718 aaKnown RBP16.15■□□□□ 0.18
CIT-219ENST00000612548 CCDC113Q9H0I3 377 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 HDAC6Q9UBN7 1215 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 ITIH6Q6UXX5 1313 aa16.15■□□□□ 0.18
CIT-219ENST00000612548 GOLGA8IPA6NC78 632 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 GOLGA8JA6NMD2 632 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 PRKCBP05771 671 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 GSDMDP57764 484 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 PTENP60484 403 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 NKX3-2P78367 333 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 GOLGA8FQ08AF8 430 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 GOLGA8DPQ0D2H9 430 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 TBX2Q13207 712 aaPredicted RBP16.14■□□□□ 0.17
CIT-219ENST00000612548 SYCP1Q15431 976 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 TCERG1LQ5VWI1 586 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 TMEM174Q8WUU8 243 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 SAAL1Q96ER3 474 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 BORCS6Q96GS4 357 aa16.14■□□□□ 0.17
CIT-219ENST00000612548 FAM49AQ9H0Q0 323 aaPredicted RBP16.14■□□□□ 0.17
CIT-219ENST00000612548 A0A087WZ62 844 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 A0A1W2PQC6 194 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 C17orf102A2RUQ5 167 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 MBLAC1A4D2B0 266 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 INO80B-WBP1J3KQ70 363 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 PIGRP01833 764 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 CYP2C9P11712 490 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 PHKA2P46019 1235 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 KLK7P49862 253 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 ZNF200P98182 395 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 MAPK6Q16659 721 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 RUFY4Q6ZNE9 571 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 KIAA0319LQ8IZA0 1049 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 CCDC155Q8N6L0 562 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 C7orf31Q8N865 590 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 KLHDC9Q8NEP7 349 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 SCLT1Q96NL6 688 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 FDXACB1Q9BRP7 624 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 INO80BQ9C086 356 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 KCNF1Q9H3M0 494 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.13■□□□□ 0.17
CIT-219ENST00000612548 TTLL13PA6NNM8 815 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 TREHO43280 583 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 MSCO60682 206 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 ASGR1P07306 291 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 GARTP22102 1010 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 MATR3P43243 847 aaKnown RBP eCLIP16.13■□□□□ 0.173e-8■■■■□ 21.7
CIT-219ENST00000612548 ADAM17P78536 824 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 MBTD1Q05BQ5 628 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 KCNH2Q12809 1159 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 KCNA10Q16322 511 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 CCDC150Q8NCX0 1101 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 CACTINQ8WUQ7 758 aaKnown RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 NLRP7Q8WX94 980 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 ZBTB45Q96K62 511 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 PCMTD1Q96MG8 357 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 MINDY3Q9H8M7 445 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 IFT122Q9HBG6 1241 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 HMX1Q9NP08 348 aaPredicted RBP16.13■□□□□ 0.17
CIT-219ENST00000612548 WBP1LQ9NX94 342 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 ANKFY1Q9P2R3 1169 aa16.13■□□□□ 0.17
CIT-219ENST00000612548 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 AFPP02771 609 aaKnown RBP16.12■□□□□ 0.17
CIT-219ENST00000612548 ADRB2P07550 413 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 CST5P28325 142 aaPredicted RBP16.12■□□□□ 0.17
CIT-219ENST00000612548 GPC3P51654 580 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 PPP2R3AQ06190 1150 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 TMEM62Q0P6H9 643 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 LRMPQ12912 555 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 NBPF20Q3BBV1 942 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 PPFIBP1Q86W92 1011 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 SH3TC2Q8TF17 1288 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 SLC35C1Q96A29 364 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 ERGIC2Q96RQ1 377 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 NFKBIZQ9BYH8 718 aa16.12■□□□□ 0.17
CIT-219ENST00000612548 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.12■□□□□ 0.174e-7■■■□□ 16.4
CIT-219ENST00000612548 SMIM35A0A1B0GVV1 85 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 CSDE1O75534 798 aaKnown RBP16.11■□□□□ 0.17
CIT-219ENST00000612548 GYPCP04921 128 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 TRIM49P0CI25 452 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 TRIM49CP0CI26 452 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 GNAT1P11488 350 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 KRT13P13646 458 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 SFPQP23246 707 aaKnown RBP eCLIP16.11■□□□□ 0.17
CIT-219ENST00000612548 NLRP11P59045 1033 aaKnown RBP16.11■□□□□ 0.17
CIT-219ENST00000612548 RBL2Q08999 1139 aa16.11■□□□□ 0.17
CIT-219ENST00000612548 BFSP1Q12934 665 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms