RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 IL9P15248 144 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 ZSCAN20P17040 1043 aaPredicted RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 ARF4P18085 180 aaPredicted RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 KCNA5P22460 613 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 IGFBP6P24592 240 aaPredicted RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 CCT6AP40227 531 aaKnown RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 MAPK7Q13164 816 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 PDIA5Q14554 519 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 SLC39A14Q15043 492 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 STK38Q15208 465 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 EEF1DP3Q658K8 133 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 TWF2Q6IBS0 349 aaKnown RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 PADI6Q6TGC4 694 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 USP49Q70CQ1 688 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 OTUD6AQ7L8S5 288 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 SRGAP1Q7Z6B7 1085 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 IFNLR1Q8IU57 520 aaPredicted RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 TMEM130Q8N3G9 435 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 ERMNQ8TAM6 284 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 ADAMTS19Q8TE59 1207 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 ATXN2LQ8WWM7 1075 aaKnown RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 HLA-CQ95604 372 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 ZNF396Q96N95 335 aaPredicted RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 CLIC6Q96NY7 704 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 RUSC1Q9BVN2 902 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 RAB34Q9BZG1 259 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 TMEM117Q9H0C3 514 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 IGFLR1Q9H665 355 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 NRDE2Q9H7Z3 1164 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 TFIP11Q9UBB9 837 aaKnown RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 CDH22Q9UJ99 828 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 DBR1Q9UK59 544 aaKnown RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 CIZ1Q9ULV3 898 aaPredicted RBP9.61□□□□□ -0.87
SNCA-212ENST00000611107 KIAA1024Q9UPX6 916 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
SNCA-212ENST00000611107 NPHP3-ACAD11A0A0J9YXS1 232 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 HIDE1A8MVS5 230 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 INO80B-WBP1J3KQ70 363 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 PER2O15055 1255 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 SPTLC2O15270 562 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 DKC1O60832 514 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNCA-212ENST00000611107 DGAT1O75907 488 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 XRCC6P12956 609 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNCA-212ENST00000611107 CYP11B2P19099 503 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 SFPQP23246 707 aaKnown RBP eCLIP9.6□□□□□ -0.87
SNCA-212ENST00000611107 SLC11A1P49279 550 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 NUCB2P80303 420 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 CLUL1Q15846 466 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 CTC1Q2NKJ3 1217 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 TMEM119Q4V9L6 283 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 SPECC1Q5M775 1068 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 HYIQ5T013 277 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 KCNT2Q6UVM3 1135 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 TAS1R3Q7RTX0 852 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 MRPL10Q7Z7H8 261 aaKnown RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 RBM23Q86U06 439 aaKnown RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 GSTCDQ8NEC7 633 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 AUTS2Q8WXX7 1259 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 P2RX5Q93086 422 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 AK8Q96MA6 479 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 NACC1Q96RE7 527 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 C11orf84Q9BUA3 381 aaPredicted RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 TRAIPQ9BWF2 469 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 INO80BQ9C086 356 aaPredicted RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 CCDC113Q9H0I3 377 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 CSRNP2Q9H175 543 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 BHMT2Q9H2M3 363 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 NXF3Q9H4D5 531 aaKnown RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 NSUN3Q9H649 340 aaKnown RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 CHST12Q9NRB3 414 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 DDX19AQ9NUU7 478 aaKnown RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 TBC1D13Q9NVG8 400 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 CLEC1BQ9P126 229 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 INPP5FQ9Y2H2 1132 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 SRPRBQ9Y5M8 271 aaKnown RBP9.6□□□□□ -0.87
SNCA-212ENST00000611107 VWA8A3KMH1 1905 aa9.6□□□□□ -0.87
SNCA-212ENST00000611107 PLXNA3P51805 1871 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 LRRIQ4A6NIV6 560 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 SFI1A8K8P3 1242 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 MEFVO15553 781 aaPredicted RBP9.59□□□□□ -0.87
SNCA-212ENST00000611107 ZNF623O75123 536 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 PPP6R2O75170 966 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 EOMESO95936 686 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 MUTP22033 750 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 LONP1P36776 959 aaKnown RBP9.59□□□□□ -0.87
SNCA-212ENST00000611107 BCAR1P56945 870 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 KRT85P78386 507 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 CACNB1Q02641 598 aaPredicted RBP9.59□□□□□ -0.87
SNCA-212ENST00000611107 ODR4Q5SWX8 454 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 AXDND1Q5T1B0 1012 aaPredicted RBP9.59□□□□□ -0.87
SNCA-212ENST00000611107 SPOUT1Q5T280 376 aaKnown RBP9.59□□□□□ -0.87
SNCA-212ENST00000611107 NT5DC1Q5TFE4 455 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 KRT79Q5XKE5 535 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 CDCA2Q69YH5 1023 aaPredicted RBP9.59□□□□□ -0.87
SNCA-212ENST00000611107 ATL3Q6DD88 541 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 KANK3Q6NY19 840 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 C1orf186Q6ZWK4 172 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 CABP7Q86V35 215 aa9.59□□□□□ -0.87
SNCA-212ENST00000611107 SLC39A11Q8N1S5 342 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms