RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 MTHFD2P13995 350 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 RAB27AP51159 221 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 NANOS3P60323 173 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 MRPS9P82933 396 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 EIF4HQ15056 248 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 ACAP2Q15057 778 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 OTOP2Q7RTS6 562 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 AMER2Q8N7J2 671 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 OR5AN1Q8NGI8 311 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 NOL10Q9BSC4 688 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 PRDM12Q9H4Q4 367 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 TMPRSS11EQ9UL52 423 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 USP18Q9UMW8 372 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 SLC4A7Q9Y6M7 1214 aa5.71□□□□□ -1.5
SMCHD1-213ENST00000609587 E2F8A0AVK6 867 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA12O60330 932 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 MARCH6O60337 910 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PARNO95453 639 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 LGALS4P56470 323 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 KRT85P78386 507 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PPARAQ07869 468 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PIN1Q13526 163 aaPredicted RBP5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 DGKDQ16760 1214 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 TMEM200BQ69YZ2 307 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 TRIM68Q6AZZ1 485 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 BMP8AQ7Z5Y6 402 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 LYSMD2Q8IV50 215 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 IFNL2Q8IZJ0 200 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 CDYL2Q8N8U2 506 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 AUTS2Q8WXX7 1259 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 HIST1H2AHQ96KK5 128 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 HIST1H2AJQ99878 128 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 SEC61A2Q9H9S3 476 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 DPP7Q9UHL4 492 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PRSS50Q9UI38 385 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 MAGEL2Q9UJ55 1249 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 SYNPO2Q9UMS6 1093 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 LUC7L2Q9Y383 392 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHB6Q9Y5E3 794 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA9Q9Y5G4 932 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA8Q9Y5G5 932 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA7Q9Y5G6 932 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA6Q9Y5G7 932 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA3Q9Y5H0 932 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 PCDHGA2Q9Y5H1 932 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 GPR45Q9Y5Y3 372 aa5.7□□□□□ -1.5
SMCHD1-213ENST00000609587 A0A0G2JNJ9 132 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 FOXS1O43638 330 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 NARSO43776 548 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 CNOT4O95628 575 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 ZNF888P0CJ79 500 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 OSMP13725 252 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 AGXTP21549 392 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 RECQLP46063 649 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 MTNR1BP49286 362 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 DPTQ07507 201 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 SPIDRQ14159 915 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 NFE2Q16621 373 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 ZMAT1Q5H9K5 638 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 EFCAB2Q5VUJ9 269 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 GPR155Q7Z3F1 870 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 KCNK18Q7Z418 384 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 OR14C36Q8NHC7 312 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 GAB3Q8WWW8 586 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 DYDC2Q96IM9 177 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 ZIM2Q9NZV7 527 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 SAE1Q9UBE0 346 aaPredicted RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 Q9UFV3 132 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 IP6K2Q9UHH9 426 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 CDC42EP3Q9UKI2 254 aa5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 ZFR2Q9UPR6 939 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-213ENST00000609587 PCSK5Q92824 1860 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 HMGCRP04035 888 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 XPAP23025 273 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 GPR15P49685 360 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 KCNQ1P51787 676 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 SLC5A3P53794 718 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 ANTXR2P58335 489 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 CDK17Q00537 523 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 ODF1Q14990 250 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 PRKD1Q15139 912 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 MUM1Q2TAK8 710 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 KRTAP15-1Q3LI76 137 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 FMNL3Q8IVF7 1028 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 SLC41A1Q8IVJ1 513 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 SSH1Q8WYL5 1049 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 JADE3Q92613 823 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 TEKT5Q96M29 485 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 GNRHR2Q96P88 292 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 SLC2A13Q96QE2 648 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 CDH19Q9H159 772 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 IFT122Q9HBG6 1241 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 ZNF277Q9NRM2 450 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 POLR3BQ9NW08 1133 aaPredicted RBP5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 CHPF2Q9P2E5 772 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 ZNF180Q9UJW8 692 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 PTPN22Q9Y2R2 807 aa5.68□□□□□ -1.5
SMCHD1-213ENST00000609587 CDY2AQ9Y6F7 541 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms