RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 HACE1Q8IYU2 909 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 DAW1Q8N136 415 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 SPIRE2Q8WWL2 714 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 BSNDQ8WZ55 320 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 KCNN1Q92952 543 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 CLIC6Q96NY7 704 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 CASD1Q96PB1 797 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 PLIN2Q99541 437 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 C17orf80Q9BSJ5 609 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 CCDC113Q9H0I3 377 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 LMAN2LQ9H0V9 348 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 CERS4Q9HA82 394 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 BLOC1S4Q9NUP1 217 aa15.76■□□□□ 0.11
HDDC2-209ENST00000609477 ZMYM2Q9UBW7 1377 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 MYO9BQ13459 2157 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 RBAK-RBAKDNI3L0D1 243 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 K7ERI5 159 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 LPXNO60711 386 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 PLS3P13797 630 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 ATF7P17544 494 aaPredicted RBP15.75■□□□□ 0.11
HDDC2-209ENST00000609477 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
HDDC2-209ENST00000609477 NPTX2P47972 431 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 MAPK7Q13164 816 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
HDDC2-209ENST00000609477 ADGRE1Q14246 886 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 PTPROQ16827 1216 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 ARSHQ5FYA8 562 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 GLB1LQ6UWU2 654 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
HDDC2-209ENST00000609477 LRRC43Q8N309 656 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 ARHGAP28Q9P2N2 729 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 KANSL3Q9P2N6 904 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 RCOR1Q9UKL0 485 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 PCDHB12Q9Y5F1 795 aa15.75■□□□□ 0.11
HDDC2-209ENST00000609477 MRPL42Q9Y6G3 142 aaKnown RBP15.75■□□□□ 0.11
HDDC2-209ENST00000609477 EPOPA6NHQ4 379 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 CCDC169A6NNP5 214 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 N4BP3O15049 544 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 PRKCBP05771 671 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 FGFR1P11362 822 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 LAG3P18627 525 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 IGFBP4P22692 258 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 CTNNB1P35222 781 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 ZNF131P52739 623 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 PEX3P56589 373 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 NUCB2P80303 420 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 GPM6BQ13491 265 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 CLLU1OSQ5K130 101 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 SPECC1Q5M775 1068 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 UBXN11Q5T124 520 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 FOXD4L5Q5VV16 416 aaPredicted RBP15.74■□□□□ 0.11
HDDC2-209ENST00000609477 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 GPBP1Q86WP2 473 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 RNF169Q8NCN4 708 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 SLC17A8Q8NDX2 589 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 MAFAQ8NHW3 353 aaPredicted RBP15.74■□□□□ 0.11
HDDC2-209ENST00000609477 FOXD4L4Q8WXT5 416 aaPredicted RBP15.74■□□□□ 0.11
HDDC2-209ENST00000609477 ADPGKQ9BRR6 497 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 TRIM6Q9C030 488 aaPredicted RBP15.74■□□□□ 0.11
HDDC2-209ENST00000609477 CUEDC2Q9H467 287 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 KMT5AQ9NQR1 393 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 RNF19AQ9NV58 838 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 TYW1Q9NV66 732 aaKnown RBP15.74■□□□□ 0.11
HDDC2-209ENST00000609477 MTUS1Q9ULD2 1270 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 ZDHHC9Q9Y397 364 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 MTCH2Q9Y6C9 303 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 MYH11P35749 1972 aa15.74■□□□□ 0.11
HDDC2-209ENST00000609477 COL6A3P12111 3177 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 INPPL1O15357 1258 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 KRT85P78386 507 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 UBE3AQ05086 875 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 DNM1Q05193 864 aaKnown RBP15.73■□□□□ 0.11
HDDC2-209ENST00000609477 MCM6Q14566 821 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 PAN2Q504Q3 1202 aaKnown RBP15.73■□□□□ 0.11
HDDC2-209ENST00000609477 SV2BQ7L1I2 683 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 SPRED2Q7Z698 418 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 HELQQ8TDG4 1101 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 MRPL38Q96DV4 380 aaKnown RBP15.73■□□□□ 0.11
HDDC2-209ENST00000609477 CPB2Q96IY4 423 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 PYM1Q9BRP8 204 aaKnown RBP15.73■□□□□ 0.11
HDDC2-209ENST00000609477 LRRC27Q9C0I9 530 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 RSAD1Q9HA92 442 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 GIT1Q9Y2X7 761 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 IPPQ9Y573 584 aa15.73■□□□□ 0.11
HDDC2-209ENST00000609477 RFXAPO00287 272 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 OFD1O75665 1012 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 KRT18P05783 430 aaKnown RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 ITGA4P13612 1032 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 IBSPP21815 317 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 PPM1AP35813 382 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 STAT6P42226 847 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 ME1P48163 572 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 GATMP50440 423 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 GIT2Q14161 759 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 DCAF4L1Q3SXM0 396 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 NOMO2Q5JPE7 1267 aa15.72■□□□□ 0.11
HDDC2-209ENST00000609477 AXDND1Q5T1B0 1012 aaPredicted RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 SPOUT1Q5T280 376 aaKnown RBP15.72■□□□□ 0.11
HDDC2-209ENST00000609477 AGMOQ6ZNB7 445 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms