RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 RBM46Q8TBY0 533 aaKnown RBP13.47□□□□□ -0.25
CTCFL-218ENST00000608440 ESR2Q92731 530 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 GLG1Q92896 1179 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 MIPEPQ99797 713 aa13.47□□□□□ -0.25
CTCFL-218ENST00000608440 PUS7LQ9H0K6 701 aaKnown RBP13.47□□□□□ -0.25
CTCFL-218ENST00000608440 DYTNA2CJ06 578 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 IPO5O00410 1097 aaKnown RBP13.46□□□□□ -0.25
CTCFL-218ENST00000608440 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
CTCFL-218ENST00000608440 COL6A2P12110 1019 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 POLR2FP61218 127 aaKnown RBP13.46□□□□□ -0.25
CTCFL-218ENST00000608440 CDR2Q01850 454 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 KCTD21Q4G0X4 260 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 KLHL35Q6PF15 583 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 DZIP1Q86YF9 867 aaKnown RBP13.46□□□□□ -0.25
CTCFL-218ENST00000608440 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 SH3TC2Q8TF17 1288 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 PRPF31Q8WWY3 499 aaKnown RBP13.46□□□□□ -0.25
CTCFL-218ENST00000608440 RSPH1Q8WYR4 309 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 TMED5Q9Y3A6 229 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 SPO11Q9Y5K1 396 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 C4AP0C0L4 1744 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
CTCFL-218ENST00000608440 IDO1P14902 403 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 PORP16435 677 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-218ENST00000608440 EMP3P54852 163 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 COG7P83436 770 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 MYBPC2Q14324 1141 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 MTFR1Q15390 333 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 C6orf183Q5T699 404 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 HGSNATQ68CP4 663 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 VSTM1Q6UX27 236 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.26
CTCFL-218ENST00000608440 COPRSQ9NQ92 184 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 ADAMTS1Q9UHI8 967 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 TSC22D4Q9Y3Q8 395 aa13.46□□□□□ -0.26
CTCFL-218ENST00000608440 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 ZFYP08048 801 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 SMARCA1P28370 1054 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 RXRBP28702 533 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 TAF1BQ53T94 588 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 LRRC43Q8N309 656 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 GAB3Q8WWW8 586 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 CADM1Q9BY67 442 aaKnown RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 UBA5Q9GZZ9 404 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 STMN4Q9H169 189 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 LUC7LQ9NQ29 371 aaKnown RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 CROTQ9UKG9 612 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 SIK3Q9Y2K2 1263 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 RPTORQ8N122 1335 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 MAPK13O15264 365 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 PRDM1O75626 825 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 GEMIN4P57678 1058 aaKnown RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 TCIRG1Q13488 830 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 USH1GQ495M9 461 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 ERMNQ8TAM6 284 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 BAP1Q92560 729 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 CYTH2Q99418 400 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 ZKSCAN3Q9BRR0 538 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 STK33Q9BYT3 514 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 ZDHHC18Q9NUE0 388 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 IQSEC3Q9UPP2 1182 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-218ENST00000608440 DOLKQ9UPQ8 538 aa13.45□□□□□ -0.26
CTCFL-218ENST00000608440 UTYO14607 1347 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 A0A087WZG4 1122 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 A0A087X0T9 212 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 LOC102724428A0A0B4J2F2 783 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 FAM170AA1A519 330 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 CCDC188H7C350 402 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 DDX3XO00571 662 aaKnown RBP eCLIP13.44□□□□□ -0.261e-10■■□□□ 13.3
CTCFL-218ENST00000608440 RGL2O15211 777 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 FAM228BP0C875 321 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 IFNAR1P17181 557 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 PTPN4P29074 926 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 RXRGP48443 463 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 USP11P51784 963 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 SIK1P57059 783 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 DCTN2Q13561 401 aaKnown RBP13.44□□□□□ -0.26
CTCFL-218ENST00000608440 SLC9C1Q4G0N8 1177 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 RBM44Q6ZP01 1051 aaKnown RBP13.44□□□□□ -0.26
CTCFL-218ENST00000608440 SCYL3Q8IZE3 742 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 SMC6Q96SB8 1091 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 CENPOQ9BU64 300 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 SLITRK6Q9H5Y7 841 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 DNAJC17Q9NVM6 304 aaKnown RBP13.44□□□□□ -0.26
CTCFL-218ENST00000608440 DSG1Q02413 1049 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 MECOMQ03112 1051 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 THOC5Q13769 683 aaKnown RBP13.44□□□□□ -0.26
CTCFL-218ENST00000608440 PDXDC1Q6P996 788 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 DQX1Q8TE96 717 aaKnown RBP13.44□□□□□ -0.26
CTCFL-218ENST00000608440 SPOCK2Q92563 424 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 TCP11L1Q9NUJ3 509 aa13.44□□□□□ -0.26
CTCFL-218ENST00000608440 ADCY3O60266 1144 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms