RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GRXCR1A8MXD5 290 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 SLC16A4O15374 487 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 EOMESO95936 686 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 MYL1P05976 194 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 MAPTP10636 758 aaKnown RBP15.7■□□□□ 0.1
CTSA-219ENST00000607841 LIG1P18858 919 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 HOXA11P31270 313 aaPredicted RBP15.7■□□□□ 0.1
CTSA-219ENST00000607841 NCKAP1LP55160 1127 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 AMHR2Q16671 573 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 LONRF3Q496Y0 759 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 FAM109BQ6ICB4 259 aaPredicted RBP15.7■□□□□ 0.1
CTSA-219ENST00000607841 FAM117BQ6P1L5 589 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 CNNM4Q6P4Q7 775 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 TMEM87AQ8NBN3 555 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 TMEM161BQ8NDZ6 487 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 CNNM3Q8NE01 707 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 STAMQ92783 540 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 DNAJC19Q96DA6 116 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 YME1L1Q96TA2 773 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 PBX4Q9BYU1 374 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 TRIM9Q9C026 710 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 CCDC113Q9H0I3 377 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 TMEM161AQ9NX61 479 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 RANBP2P49792 3224 aaKnown RBP15.7■□□□□ 0.1
CTSA-219ENST00000607841 TRIOBPQ9H2D6 2365 aa15.7■□□□□ 0.1
CTSA-219ENST00000607841 ADGRA3Q8IWK6 1321 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 CNTNAP2Q9UHC6 1331 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 A0A1B0GUA9 196 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 RBAK-RBAKDNI3L0D1 243 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 K7ENM7 598 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 HOXA2O43364 376 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 ACTN4O43707 911 aaKnown RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 ZNF202O95125 648 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 ARF4P18085 180 aaPredicted RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 IBSPP21815 317 aaPredicted RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 AFMP43652 599 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 RABGGTBP53611 331 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 ASIC1P78348 528 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 HERC4Q5GLZ8 1057 aaPredicted RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 KANK3Q6NY19 840 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 APBB1IPQ7Z5R6 666 aaPredicted RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 TMCO2Q7Z6W1 182 aaPredicted RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 ECHDC2Q86YB7 292 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 HACE1Q8IYU2 909 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 KCNN1Q92952 543 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 PGBD4Q96DM1 585 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 PAGE5Q96GU1 130 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 MRPL4Q9BYD3 311 aaKnown RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 TRIM6Q9C030 488 aaPredicted RBP15.69■□□□□ 0.1
CTSA-219ENST00000607841 FAM105AQ9NUU6 356 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 PANK4Q9NVE7 773 aa15.69■□□□□ 0.1
CTSA-219ENST00000607841 SIP14410 1827 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 TET1Q8NFU7 2136 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 FRMD3A2A2Y4 597 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 N4BP3O15049 544 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 B4GALT5O43286 388 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 ZNF623O75123 536 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 DNAJB2P25686 324 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 HTRA4P83105 476 aaPredicted RBP15.68■□□□□ 0.1
CTSA-219ENST00000607841 GPR153Q6NV75 609 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 SLC27A1Q6PCB7 646 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 CLEC17AQ6ZS10 378 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 CRIPAKQ8N1N5 446 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 RSPH1Q8WYR4 309 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 TIFAQ96CG3 184 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 CPB2Q96IY4 423 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 GBP4Q96PP9 640 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 ADPGKQ9BRR6 497 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 GOLPH3LQ9H4A5 285 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 ST6GALNAC4Q9H4F1 302 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 MRPL44Q9H9J2 332 aaKnown RBP15.68■□□□□ 0.1
CTSA-219ENST00000607841 OLFML3Q9NRN5 406 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 PCDHB2Q9Y5E7 798 aa15.68■□□□□ 0.1
CTSA-219ENST00000607841 PVALEFA0A1B0GWK0 134 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 DGKIO75912 1065 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 PBX2P40425 430 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 UBE2HP62256 183 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 ATF7IP2Q5U623 682 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 KRBA2Q6ZNG9 492 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 STXBP4Q6ZWJ1 553 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 UNC13DQ70J99 1090 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 ZNF720Q7Z2F6 126 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 ABI1Q8IZP0 508 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 FMR1NBQ8N0W7 255 aaPredicted RBP15.67■□□□□ 0.1
CTSA-219ENST00000607841 RNF169Q8NCN4 708 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 HVCN1Q96D96 273 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 SLC28A3Q9HAS3 691 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 UBN1Q9NPG3 1134 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 TBX20Q9UMR3 447 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 PCDHB13Q9Y5F0 798 aa15.67■□□□□ 0.1
CTSA-219ENST00000607841 TMEM265A0A087WTH1 108 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 SOX1O00570 391 aaPredicted RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 NMT1P30419 496 aaKnown RBP15.66■□□□□ 0.1
CTSA-219ENST00000607841 GTF2BQ00403 316 aa15.66■□□□□ 0.1
CTSA-219ENST00000607841 CUL4BQ13620 913 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms