RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 GAS2O43903 313 aaKnown RBP14.69□□□□□ -0.06
RPS28-204ENST00000602140 WEE2P0C1S8 567 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 HOXA11P31270 313 aaPredicted RBP14.69□□□□□ -0.06
RPS28-204ENST00000602140 KRT2P35908 639 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
RPS28-204ENST00000602140 AK2P54819 239 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 SPIRE1Q08AE8 756 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 GIT2Q14161 759 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 ANKRD1Q15327 319 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 RARS2Q5T160 578 aaKnown RBP14.69□□□□□ -0.06
RPS28-204ENST00000602140 IER5LQ5T953 404 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 MRPL10Q7Z7H8 261 aaKnown RBP14.69□□□□□ -0.06
RPS28-204ENST00000602140 FERMT3Q86UX7 667 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 TPH2Q8IWU9 490 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 SLFN12Q8IYM2 578 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 C12orf76Q8N812 135 aaPredicted RBP14.69□□□□□ -0.06
RPS28-204ENST00000602140 RNF149Q8NC42 400 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 TCP11Q8WWU5 503 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 WASF1Q92558 559 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 ASIC4Q96FT7 647 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 NECTIN4Q96NY8 510 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 RSAD1Q9HA92 442 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 IRAK3Q9Y616 596 aa14.69□□□□□ -0.06
RPS28-204ENST00000602140 C2CD4DB7Z1M9 353 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 ASAP2O43150 1006 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 DDHD2O94830 711 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 FDPSP14324 419 aaKnown RBP14.68□□□□□ -0.06
RPS28-204ENST00000602140 EPCAMP16422 314 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 MTHFRP42898 656 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 ANAPC15P60006 121 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 UBXN11Q5T124 520 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 KANK3Q6NY19 840 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 NECAB1Q8N987 351 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 PRSS33Q8NF86 280 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 RIPOR3Q96MK2 946 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 FAM193BQ96PV7 902 aaPredicted RBP14.68□□□□□ -0.06
RPS28-204ENST00000602140 MTRQ99707 1265 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 VN1R3Q9BXE9 311 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 BRMS1Q9HCU9 246 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 DZANK1Q9NVP4 752 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 PIEZO1Q92508 2521 aa14.68□□□□□ -0.06
RPS28-204ENST00000602140 ERLIN2O94905 339 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 SLITRK3O94933 977 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 POMCP01189 267 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 ALDH2P05091 517 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 PTPN14Q15678 1187 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 KREMEN2Q8NCW0 462 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 SLC22A17Q8WUG5 538 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 TNFRSF25Q93038 417 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 EIF2AK1Q9BQI3 630 aaKnown RBP14.67□□□□□ -0.06
RPS28-204ENST00000602140 XPNPEP1Q9NQW7 623 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 KANSL3Q9P2N6 904 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 PCDHA12Q9UN75 941 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 FAN1Q9Y2M0 1017 aa14.67□□□□□ -0.06
RPS28-204ENST00000602140 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 NRP1O14786 923 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 LARGE1O95461 756 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 SSBP05455 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
RPS28-204ENST00000602140 NEFLP07196 543 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 ITGA4P13612 1032 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 NCLP19338 710 aaKnown RBP14.66□□□□□ -0.06
RPS28-204ENST00000602140 VCPP55072 806 aaKnown RBP14.66□□□□□ -0.06
RPS28-204ENST00000602140 PTENP60484 403 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 MXD4Q14582 209 aaPredicted RBP14.66□□□□□ -0.06
RPS28-204ENST00000602140 CALCRLQ16602 461 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 ME3Q16798 604 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 ATAT1Q5SQI0 421 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 KIAA1841Q6NSI8 718 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 CABP7Q86V35 215 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 PPFIBP1Q86W92 1011 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 SMG8Q8ND04 991 aaKnown RBP14.66□□□□□ -0.06
RPS28-204ENST00000602140 TMEM175Q9BSA9 504 aa14.66□□□□□ -0.06
RPS28-204ENST00000602140 DBR1Q9UK59 544 aaKnown RBP14.66□□□□□ -0.06
RPS28-204ENST00000602140 BTBD18B2RXH4 712 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 TSPAN1O60635 241 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 PDGFBP01127 241 aaPredicted RBP14.65□□□□□ -0.06
RPS28-204ENST00000602140 CNPP09543 421 aaKnown RBP14.65□□□□□ -0.06
RPS28-204ENST00000602140 KLRC2P26717 231 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 FOSBP53539 338 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 PTPN5P54829 565 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 NCBP1Q09161 790 aaKnown RBP14.65□□□□□ -0.06
RPS28-204ENST00000602140 MTMR3Q13615 1198 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 NOTUMQ6P988 496 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 TMC5Q6UXY8 1006 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 CNNM3Q8NE01 707 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 NSUN7Q8NE18 718 aaKnown RBP14.65□□□□□ -0.06
RPS28-204ENST00000602140 FEZF2Q8TBJ5 459 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 GTF3C6Q969F1 213 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 CPB2Q96IY4 423 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 KLHL5Q96PQ7 755 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 PHOX2BQ99453 314 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 PRRX2Q99811 253 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 HSD17B14Q9BPX1 270 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 EMILIN2Q9BXX0 1053 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 EIF2AQ9BY44 585 aaKnown RBP14.65□□□□□ -0.06
RPS28-204ENST00000602140 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 TTC12Q9H892 705 aaPredicted RBP14.65□□□□□ -0.06
RPS28-204ENST00000602140 UBN1Q9NPG3 1134 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 STK39Q9UEW8 545 aa14.65□□□□□ -0.06
RPS28-204ENST00000602140 SORCS3Q9UPU3 1222 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms