RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ADAM32Q8TC27 787 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 TMEM40Q8WWA1 233 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 CRYGNQ8WXF5 182 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 SUSD6Q92537 303 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 RIT2Q99578 217 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 ARHGAP9Q9BRR9 750 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 INO80BQ9C086 356 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-226ENST00000591534 DISC1Q9NRI5 854 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 STK39Q9UEW8 545 aa10.62□□□□□ -0.71
BRCA1-226ENST00000591534 NLRC5Q86WI3 1866 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 FSCN2O14926 492 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 GAS7O60861 476 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 ATP4AP20648 1035 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 PSMA5P28066 241 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 CDC27P30260 824 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 CLCN3P51790 818 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 ERVFC1P60507 584 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 ITIH3Q06033 890 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 GIT2Q14161 759 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 DSC3Q14574 896 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 ANKRD54Q6NXT1 300 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 BLOC1S2Q6QNY1 142 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 RNF169Q8NCN4 708 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 RDM1Q8NG50 284 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 FOXJ1Q92949 421 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 PPP1R16BQ96T49 567 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 JPH2Q9BR39 696 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-226ENST00000591534 RNF26Q9BY78 433 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-226ENST00000591534 GCOM2Q9BZD3 368 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-226ENST00000591534 CWH43Q9H720 699 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 CHST12Q9NRB3 414 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 SNX14Q9Y5W7 946 aa10.61□□□□□ -0.71
BRCA1-226ENST00000591534 A0A0U1RQF3 1178 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 ATP9BO43861 1147 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 DARSP14868 501 aaKnown RBP10.6□□□□□ -0.71
BRCA1-226ENST00000591534 SFPQP23246 707 aaKnown RBP eCLIP10.6□□□□□ -0.71
BRCA1-226ENST00000591534 HSPA4P34932 840 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 CA8P35219 290 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 PTPN21Q16825 1174 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 LRCH2Q5VUJ6 765 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 Q6ZUG5 572 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 ECHDC2Q86YB7 292 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 EXOC8Q8IYI6 725 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 TRIM22Q8IYM9 498 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 UBALD2Q8IYN6 164 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 FBXL16Q8N461 479 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 MRPL43Q8N983 215 aaKnown RBP10.6□□□□□ -0.71
BRCA1-226ENST00000591534 FAM174AQ8TBP5 190 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 KCNB2Q92953 911 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 BRF1Q92994 677 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 TMEM169Q96HH4 297 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 RIPOR3Q96MK2 946 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 JAKMIP1Q96N16 626 aaKnown RBP10.6□□□□□ -0.71
BRCA1-226ENST00000591534 CASD1Q96PB1 797 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 TEKT3Q9BXF9 490 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 ADAMTS10Q9H324 1103 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 SH3GLB2Q9NR46 395 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
BRCA1-226ENST00000591534 DKC1O60832 514 aaKnown RBP eCLIP10.59□□□□□ -0.71
BRCA1-226ENST00000591534 MTHFRP42898 656 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 GPC3P51654 580 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 NLRP5P59047 1200 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 PRKCEQ02156 737 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 APOBRQ0VD83 1088 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 MTMR3Q13615 1198 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 C8orf34Q49A92 452 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 XKR3Q5GH77 459 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 LLGL2Q6P1M3 1020 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 CPLX2Q6PUV4 134 aaKnown RBP10.59□□□□□ -0.71
BRCA1-226ENST00000591534 FAM177A1Q8N128 213 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-226ENST00000591534 DEPDC4Q8N2C3 294 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 LRRC71Q8N4P6 559 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 SLC26A6Q9BXS9 759 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 S1PR5Q9H228 398 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 ADAM7Q9H2U9 754 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 DZANK1Q9NVP4 752 aa10.59□□□□□ -0.71
BRCA1-226ENST00000591534 C5orf42Q9H799 3197 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 MSH4O15457 936 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 CHMP2AO43633 222 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 CXCL14O95715 111 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 IFNAR1P17181 557 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 RAB27AP51159 221 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 POLGP54098 1239 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-226ENST00000591534 ANAPC15P60006 121 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 KCNC4Q03721 635 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 KCNC3Q14003 757 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 BECN1Q14457 450 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 AGERQ15109 404 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 C4orf48Q5BLP8 95 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 ATAT1Q5SQI0 421 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 GALNT17Q6IS24 598 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 ELMSAN1Q6PJG2 1045 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 GLB1LQ6UWU2 654 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 MIER3Q7Z3K6 550 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 ZNF410Q86VK4 478 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 PPFIBP1Q86W92 1011 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 SLC39A11Q8N1S5 342 aa10.58□□□□□ -0.72
BRCA1-226ENST00000591534 LINC01465Q8N7H1 131 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms