RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 DBR1Q9UK59 544 aaKnown RBP11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.53
CLPTM1-211ENST00000589347 FAM186AA6NE01 2351 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 INO80B-WBP1J3KQ70 363 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 CSDE1O75534 798 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 FGF18O76093 207 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 PRPHP41219 470 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 KRT17Q04695 432 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 POU5F1BQ06416 359 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 IER5LQ5T953 404 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 NOTUMQ6P988 496 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 POTEGQ6S5H5 508 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 ZNF579Q8NAF0 562 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 PIGOQ8TEQ8 1089 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 CASD1Q96PB1 797 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 NFKBIZQ9BYH8 718 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 TRIM6Q9C030 488 aaPredicted RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 C2orf40Q9H1Z8 148 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 CWH43Q9H720 699 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 IFT122Q9HBG6 1241 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 XPNPEP1Q9NQW7 623 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 ENTPD7Q9NQZ7 604 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 LRWD1Q9UFC0 647 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 MUTYHQ9UIF7 546 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 LZTS1Q9Y250 596 aa11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 PDCD11Q14690 1871 aaKnown RBP11.76□□□□□ -0.53
CLPTM1-211ENST00000589347 EPG5Q9HCE0 2579 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 PLXNA3P51805 1871 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 LRRIQ4A6NIV6 560 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 GFRA3O60609 400 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 MED24O75448 989 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 ATF7P17544 494 aaPredicted RBP11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 NDUFV1P49821 464 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 PTENP60484 403 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 PLCB3Q01970 1234 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 PTGDRQ13258 359 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 CAPSQ13938 189 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 PPP2R5AQ15172 486 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 SMAD2Q15796 467 aaKnown RBP11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 CLLU1OSQ5K130 101 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 KRT79Q5XKE5 535 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 SPPL3Q8TCT6 385 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 MICAL1Q8TDZ2 1067 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 SNX29Q8TEQ0 813 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 MRPS27Q92552 414 aaKnown RBP11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 TMEM169Q96HH4 297 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 CDCA3Q99618 268 aaPredicted RBP11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 RNF19AQ9NV58 838 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 INPP5FQ9Y2H2 1132 aa11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 MTCL1Q9Y4B5 1905 aaKnown RBP11.75□□□□□ -0.53
CLPTM1-211ENST00000589347 ZNF292O60281 2723 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 ZBTB39O15060 712 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 ZNF623O75123 536 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 ZC3H11AO75152 810 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 BMP15O95972 392 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 PDCP20941 246 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 ALDH7A1P49419 539 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 HYAL1Q12794 435 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 NBR1Q14596 966 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 TMEM132AQ24JP5 1023 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 NOMO2Q5JPE7 1267 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 DTHD1Q6ZMT9 781 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 ASAP3Q8TDY4 903 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 EDAQ92838 391 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 PRIMPOLQ96LW4 560 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 FAM193BQ96PV7 902 aaPredicted RBP11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 IGFLR1Q9H665 355 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 RSAD1Q9HA92 442 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 PRMT7Q9NVM4 692 aaPredicted RBP11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 SPG21Q9NZD8 308 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 DAXXQ9UER7 740 aaPredicted RBP11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 STK39Q9UEW8 545 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 PCDHB6Q9Y5E3 794 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 PCDHB2Q9Y5E7 798 aa11.74□□□□□ -0.53
CLPTM1-211ENST00000589347 TSPAN1O60635 241 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 CD2BP2O95400 341 aaKnown RBP11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 ITGA4P13612 1032 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 GLRA2P23416 452 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 DNAJB1P25685 340 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 CA8P35219 290 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 ARL2P36404 184 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 LTBRP36941 435 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 NAMPTP43490 491 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 NRIP1P48552 1158 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 MBTD1Q05BQ5 628 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 PDIA5Q14554 519 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 SMC1AQ14683 1233 aaKnown RBP11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 CTC1Q2NKJ3 1217 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 PLPP4Q5VZY2 271 aa11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 LARP1BQ659C4 914 aaKnown RBP11.73□□□□□ -0.53
CLPTM1-211ENST00000589347 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms