RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CABP5Q9NP86 173 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 SAGE1Q9NXZ1 904 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 NOB1Q9ULX3 412 aaKnown RBP2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 TESMINQ9Y4I5 508 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 MRFAP1Q9Y605 127 aa2.35□□□□□ -2.03
SMCHD1-211ENST00000584897 C22orf46C9J442 243 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 FZD9O00144 591 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 PRODHO43272 600 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 EFCAB14O75071 495 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 H2AFYO75367 372 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 WDHD1O75717 1129 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM153BP0C7A2 387 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 THBS2P35442 1172 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 CDK8P49336 464 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ST5P78524 1137 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ADAM17P78536 824 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 HTRA3P83110 453 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ARHGAP44Q17R89 818 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 KIZQ2M2Z5 673 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 STEAP3Q658P3 488 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ADGRE4PQ86SQ3 457 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 NME9Q86XW9 330 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 THNSL2Q86YJ6 484 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 PPM1KQ8N3J5 372 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ADCY4Q8NFM4 1077 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 PNISRQ8TF01 805 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 SHISA4Q96DD7 197 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 FGD4Q96M96 766 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 DLL4Q9NR61 685 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 SLC5A4Q9NY91 659 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 MARCH2Q9P0N8 246 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ARHGAP28Q9P2N2 729 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 CROTQ9UKG9 612 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 NUDCQ9Y266 331 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 USP47Q96K76 1375 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 MAP3K19Q56UN5 1328 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 IGSF1Q8N6C5 1336 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 LAMB2P55268 1798 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 A0A087X0B3 334 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 CCDC194A0A1B0GVG4 234 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 SHOXO15266 292 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 DAPK3O43293 454 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 GAS7O60861 476 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 EPHB1P54762 984 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 SUMO1P63165 101 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 USP10Q14694 798 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 AMOTQ4VCS5 1084 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 DALRD3Q5D0E6 543 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 RTP2Q5QGT7 225 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 FAM180AQ6UWF9 173 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 MTDHQ86UE4 582 aaKnown RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 TMEM192Q8IY95 271 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 TTC1Q99614 292 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 SPATA25Q9BR10 227 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 C11orf84Q9BUA3 381 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 CSRNP2Q9H175 543 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 BCAS3Q9H6U6 928 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 PARPBPQ9NWS1 579 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 DTLQ9NZJ0 730 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 CGGBP1Q9UFW8 167 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 TSC22D4Q9Y3Q8 395 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 ZNF451Q9Y4E5 1061 aa2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 COL5A3P25940 1745 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-211ENST00000584897 A0A1W2PQH9 124 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 ALDH1L1O75891 902 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 U2AF1L5P0DN76 240 aaPredicted RBP2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 GNAT1P11488 350 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 ECI1P42126 302 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 U2AF1Q01081 240 aaKnown RBP eCLIP2.34□□□□□ -2.043e-6■■■□□ 15.5
SMCHD1-211ENST00000584897 PICALMQ13492 652 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 TRIM59Q8IWR1 403 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 FEZF2Q8TBJ5 459 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 NINJ1Q92982 152 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 IER2Q9BTL4 223 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 HDAC5Q9UQL6 1122 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 CCDC88AQ3V6T2 1871 aa2.34□□□□□ -2.04
SMCHD1-211ENST00000584897 ARNTLO00327 626 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 TRIM13O60858 407 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 OCRLQ01968 901 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 ADCY1Q08828 1119 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 PABPC4Q13310 644 aaKnown RBP eCLIP2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 ACAP2Q15057 778 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 SMAD2Q15796 467 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 CCDC157Q569K6 752 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 MILR1Q7Z6M3 343 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 RNF180Q86T96 592 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 KIF18BQ86Y91 864 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 MYO1HQ8N1T3 1032 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 ZBTB38Q8NAP3 1195 aaPredicted RBP2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 SMARCC2Q8TAQ2 1214 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 LRGUKQ96M69 825 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 FCRL3Q96P31 734 aaPredicted RBP2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 DHRS4Q9BTZ2 278 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 PRO3102Q9H379 93 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 ADGRF5Q8IZF2 1346 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 SHISA3A0PJX4 238 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 PLD2O14939 933 aa2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 XPOTO43592 962 aaKnown RBP2.33□□□□□ -2.04
SMCHD1-211ENST00000584897 NOBOXO60393 691 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms