RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ATP8B1O43520 1251 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PSAPP07602 524 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PRKCEQ02156 737 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PPFIA1Q13136 1202 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PALB2Q86YC2 1186 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 TARS2Q9BW92 718 aaKnown RBP12.18□□□□□ -0.46
TOP3A-217ENST00000584582 C4AP0C0L4 1744 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 C4BP0C0L5 1744 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 THAP12O43422 761 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 MAPK4P31152 587 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 DYNLT1P63172 113 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PPP3CAQ08209 521 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 HGSNATQ68CP4 663 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 TRIM50Q86XT4 487 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 ARHGEF19Q8IW93 802 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 AGBL3Q8NEM8 1001 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 TAS1R2Q8TE23 839 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 C1orf54Q8WWF1 131 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 IWS1Q96ST2 819 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 MSTO1Q9BUK6 570 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 MED4Q9NPJ6 270 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 CNOT8Q9UFF9 292 aaKnown RBP12.18□□□□□ -0.46
TOP3A-217ENST00000584582 RASAL2Q9UJF2 1139 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 HPCAL4Q9UM19 191 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PLAAQ9Y263 795 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 ZNF233A6NK53 670 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PIK3R2O00459 728 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 DDNO94850 711 aaPredicted RBP12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PLS3P13797 630 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 NSFP46459 744 aaKnown RBP12.18□□□□□ -0.46
TOP3A-217ENST00000584582 NPTX2P47972 431 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 Q3C1V9 767 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 DAB2IPQ5VWQ8 1189 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 ARL8AQ96BM9 186 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 PPP1R9AQ9ULJ8 1098 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 DAAM1Q9Y4D1 1078 aa12.18□□□□□ -0.46
TOP3A-217ENST00000584582 IGLV3-22A0A075B6J6 115 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ANKRD63C9JTQ0 380 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 MYO1FO00160 1098 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 CETN2P41208 172 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 KRT76Q01546 638 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 SPIRE1Q08AE8 756 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ZCWPW2Q504Y3 356 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 BRDTQ58F21 947 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 SLC47A2Q86VL8 602 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ZBTB45Q96K62 511 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 RNPC3Q96LT9 517 aaKnown RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 RIT2Q99578 217 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 AGPAT1Q99943 283 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 APOL6Q9BWW8 343 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 STK33Q9BYT3 514 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 TRAF3IP3Q9Y228 551 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ACTN2P35609 894 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 SPIRE2Q8WWL2 714 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 SLC5A5Q92911 643 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 NUP85Q9BW27 656 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 AGO4Q9HCK5 861 aaKnown RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 MLXIPLQ9NP71 852 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 SEL1LQ9UBV2 794 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 CYP3A7-CYP3A51PA0A087WV96 503 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 F8VZ95 297 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 CYP3A7P24462 503 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 BACE1P56817 501 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 MRPS9P82933 396 aaKnown RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 SEMA3FQ13275 785 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ORC1Q13415 861 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 PGM5Q15124 567 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 MIS18BP1Q6P0N0 1132 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 MOXD1Q6UVY6 613 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 LPAR1Q92633 364 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 TATDN2Q93075 761 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ACSF2Q96CM8 615 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 EDEM3Q9BZQ6 932 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ACAD9Q9H845 621 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 TBK1Q9UHD2 729 aa12.17□□□□□ -0.46
TOP3A-217ENST00000584582 NOVA2Q9UNW9 492 aaKnown RBP12.17□□□□□ -0.46
TOP3A-217ENST00000584582 PI4K2BG5E9Z4 385 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 MMEP08473 750 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 GUCY1A3Q02108 690 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 STXBP2Q15833 593 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 PHLDB3Q6NSJ2 640 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 LLGL2Q6P1M3 1020 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 FOXR1Q6PIV2 292 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
TOP3A-217ENST00000584582 RHPN2Q8IUC4 686 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ANKRD42Q8N9B4 389 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 TPCN2Q8NHX9 752 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 RANBP17Q9H2T7 1088 aaKnown RBP12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ODF2LQ9ULJ1 636 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 ANKRD36CQ5JPF3 1778 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 CHD4Q14839 1912 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 VWA5AO00534 786 aa12.16□□□□□ -0.46
TOP3A-217ENST00000584582 LIG3P49916 1009 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms