RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 HACE1Q8IYU2 909 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TDRD5Q8NAT2 981 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 RNF149Q8NC42 400 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CNNM3Q8NE01 707 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PRPF31Q8WWY3 499 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 AUTS2Q8WXX7 1259 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 GTF3C6Q969F1 213 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 IGSF21Q96ID5 467 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PRRX2Q99811 253 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 BACH2Q9BYV9 841 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TRIM6Q9C030 488 aaPredicted RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 S1PR5Q9H228 398 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ADAM7Q9H2U9 754 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 POMKQ9H5K3 350 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SFXN1Q9H9B4 322 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 RGL1Q9NZL6 768 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DNAJB4Q9UDY4 337 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DBR1Q9UK59 544 aaKnown RBP9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PCDHB2Q9Y5E7 798 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NCOR1O75376 2440 aa9.71□□□□□ -0.86
CDK5RAP3-229ENST00000583697 FAM205CA6NFA0 338 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 INO80B-WBP1J3KQ70 363 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DTNBO60941 627 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ZNF623O75123 536 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 OFD1O75665 1012 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SEC24BO95487 1268 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 URODP06132 367 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 GALTP07902 379 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SLC11A1P49279 550 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 FOSBP53539 338 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PTPN5P54829 565 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SPIRE1Q08AE8 756 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MTMR3Q13615 1198 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MXD4Q14582 209 aaPredicted RBP9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PCBP1Q15365 356 aaKnown RBP eCLIP9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 RARS2Q5T160 578 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 KIAA1841Q6NSI8 718 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NOTUMQ6P988 496 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DDX53Q86TM3 631 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CABP7Q86V35 215 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PPFIBP1Q86W92 1011 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TPH2Q8IWU9 490 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 FBXL6Q8N531 539 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ZNF579Q8NAF0 562 aaKnown RBP9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 HAS1Q92839 578 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TMEM175Q9BSA9 504 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 EMILIN2Q9BXX0 1053 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 UBN1Q9NPG3 1134 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CDH22Q9UJ99 828 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PCDHA12Q9UN75 941 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SORCS3Q9UPU3 1222 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 IRAK3Q9Y616 596 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MYO7AQ13402 2215 aa9.7□□□□□ -0.86
CDK5RAP3-229ENST00000583697 C2CD4DB7Z1M9 353 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TSPAN1O60635 241 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NR1I2O75469 434 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DGAT1O75907 488 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 LARGE1O95461 756 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CTDNEP1O95476 244 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 POMCP01189 267 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SSBP05455 408 aaKnown RBP eCLIP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ITGA4P13612 1032 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 EPCAMP16422 314 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NCLP19338 710 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 AXLP30530 894 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MLH1P40692 756 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 OR1G1P47890 313 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MRE11P49959 708 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PLXNA3P51805 1871 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 PTPN14Q15678 1187 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ME3Q16798 604 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 EARS2Q5JPH6 523 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ELMSAN1Q6PJG2 1045 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 AGMOQ6ZNB7 445 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CCDC149Q6ZUS6 474 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DIS3L2Q8IYB7 885 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NECAB1Q8N987 351 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 BCL7CQ8WUZ0 217 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CCDC51Q96ER9 411 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 EIF2AK1Q9BQI3 630 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TTC12Q9H892 705 aaPredicted RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MINDY3Q9H8M7 445 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 MRPL17Q9NRX2 175 aaKnown RBP9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SSX2IPQ9Y2D8 614 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 FAN1Q9Y2M0 1017 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 IPPQ9Y573 584 aa9.69□□□□□ -0.86
CDK5RAP3-229ENST00000583697 C2CD2LO14523 706 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 NRP1O14786 923 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 USO1O60763 962 aaKnown RBP9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 DDHD2O94830 711 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SOD2P04179 222 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 ALDH2P05091 517 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 WEE2P0C1S8 567 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 KLRC2P26717 231 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 TXKP42681 527 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 CAPSQ13938 189 aa9.68□□□□□ -0.86
CDK5RAP3-229ENST00000583697 SAFBQ15424 915 aaKnown RBP eCLIP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms