RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 FOXD4L4Q8WXT5 416 aaPredicted RBP26.45■■□□□ 1.82
LIMD2-207ENST00000579329 P2RX5Q93086 422 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 PGBD4Q96DM1 585 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 PRIMPOLQ96LW4 560 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 DRC1Q96MC2 740 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 UHRF1Q96T88 793 aaPredicted RBP26.45■■□□□ 1.82
LIMD2-207ENST00000579329 CCSER1Q9C0I3 900 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 AAASQ9NRG9 546 aa26.45■■□□□ 1.82
LIMD2-207ENST00000579329 HIP1RO75146 1068 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 ARF4P18085 180 aaPredicted RBP26.44■■□□□ 1.82
LIMD2-207ENST00000579329 GUCY2CP25092 1073 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 STK38Q15208 465 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 NAALADL2Q58DX5 795 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 HELQQ8TDG4 1101 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 CPB2Q96IY4 423 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 MRPL9Q9BYD2 267 aaKnown RBP26.44■■□□□ 1.82
LIMD2-207ENST00000579329 POLD4Q9HCU8 107 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 TYW1Q9NV66 732 aaKnown RBP26.44■■□□□ 1.82
LIMD2-207ENST00000579329 KCND2Q9NZV8 630 aa26.44■■□□□ 1.82
LIMD2-207ENST00000579329 SLC12A3P55017 1021 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 KARSQ15046 597 aaKnown RBP26.43■■□□□ 1.82
LIMD2-207ENST00000579329 MAPK6Q16659 721 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 FAM187BQ17R55 369 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 MRPL10Q7Z7H8 261 aaKnown RBP26.43■■□□□ 1.82
LIMD2-207ENST00000579329 CNNM3Q8NE01 707 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 LPPQ93052 612 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 MRPL38Q96DV4 380 aaKnown RBP26.43■■□□□ 1.82
LIMD2-207ENST00000579329 LMAN2LQ9H0V9 348 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 FZD8Q9H461 694 aa26.43■■□□□ 1.82
LIMD2-207ENST00000579329 PRRC2BQ5JSZ5 2229 aaKnown RBP26.43■■□□□ 1.82
LIMD2-207ENST00000579329 TRANK1O15050 2925 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 B4GALT5O43286 388 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 LAG3P18627 525 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 PLCG1P19174 1290 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 EFNA5P52803 228 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 MAPK7Q13164 816 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 GLB1LQ6UWU2 654 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 DAW1Q8N136 415 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 KRI1Q8N9T8 703 aaKnown RBP26.42■■□□□ 1.82
LIMD2-207ENST00000579329 CWH43Q9H720 699 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 C17orf75Q9HAS0 396 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 HCSTQ9UBK5 93 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 PCDHB12Q9Y5F1 795 aa26.42■■□□□ 1.82
LIMD2-207ENST00000579329 CNTNAP2Q9UHC6 1331 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 PRKCBP05771 671 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 NCLP19338 710 aaKnown RBP26.41■■□□□ 1.82
LIMD2-207ENST00000579329 TXLNAP40222 546 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 PEX3P56589 373 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 DMP1Q13316 513 aaPredicted RBP26.41■■□□□ 1.82
LIMD2-207ENST00000579329 CSPP1Q1MSJ5 1256 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 LONRF3Q496Y0 759 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 SPECC1Q5M775 1068 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 COLGALT1Q8NBJ5 622 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 LINC00301Q8NCQ3 95 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 EPSTI1Q96J88 318 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 CLIC6Q96NY7 704 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 KIFC3Q9BVG8 833 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 EIF2AQ9BY44 585 aaKnown RBP26.41■■□□□ 1.82
LIMD2-207ENST00000579329 CCDC113Q9H0I3 377 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 BLOC1S4Q9NUP1 217 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 CCDC39Q9UFE4 941 aa26.41■■□□□ 1.82
LIMD2-207ENST00000579329 XIRP2A4UGR9 3374 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 GRM6O15303 877 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 YEATS4O95619 227 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 PKP1Q13835 747 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 BECN1Q14457 450 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 TIGD5Q53EQ6 642 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 SLC27A1Q6PCB7 646 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 LRRC55Q6ZSA7 311 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 USP49Q70CQ1 688 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 KLHL23Q8NBE8 558 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 RAD54LQ92698 747 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 TRIM6Q9C030 488 aaPredicted RBP26.4■■□□□ 1.82
LIMD2-207ENST00000579329 TFIP11Q9UBB9 837 aaKnown RBP26.4■■□□□ 1.82
LIMD2-207ENST00000579329 IPPQ9Y573 584 aa26.4■■□□□ 1.82
LIMD2-207ENST00000579329 A0A1B0GUA9 196 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 CCDC169A6NNP5 214 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 MEIS3P2A8K0S8 358 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 ACKR2O00590 384 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 LIG1P18858 919 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 NPTX2P47972 431 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 PRPF4BQ13523 1007 aaKnown RBP26.39■■□□□ 1.82
LIMD2-207ENST00000579329 TMEM132AQ24JP5 1023 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 AGMOQ6ZNB7 445 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 HACE1Q8IYU2 909 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 SMG8Q8ND04 991 aaKnown RBP26.39■■□□□ 1.82
LIMD2-207ENST00000579329 LRRC15Q8TF66 581 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 RSAD1Q9HA92 442 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 UBN1Q9NPG3 1134 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 PLAGL2Q9UPG8 496 aa26.39■■□□□ 1.82
LIMD2-207ENST00000579329 PHLPP2Q6ZVD8 1323 aa26.39■■□□□ 1.81
LIMD2-207ENST00000579329 N4BP3O15049 544 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 SPTLC2O15270 562 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 PPP6R2O75170 966 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 OFD1O75665 1012 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 ITGB1P05556 798 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 ITGA4P13612 1032 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 RAD51AP2Q09MP3 1159 aa26.38■■□□□ 1.81
LIMD2-207ENST00000579329 SKIV2LQ15477 1246 aaKnown RBP26.38■■□□□ 1.81
LIMD2-207ENST00000579329 NOMO2Q5JPE7 1267 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms