RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DUSP28Q4G0W2 176 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CRTC2Q53ET0 693 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 SGO2Q562F6 1265 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 ARHGEF16Q5VV41 709 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 MFSD14CQ5VZR4 134 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 MCTP2Q6DN12 878 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 PPP4R3AQ6IN85 833 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 XRRA1Q6P2D8 792 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 TXNDC11Q6PKC3 985 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 PAOXQ6QHF9 649 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 EEPD1Q7L9B9 569 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 TBCKQ8TEA7 893 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 DIS3LQ8TF46 1054 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CCDC12Q8WUD4 166 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 FOXD4L4Q8WXT5 416 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 WASF1Q92558 559 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 HAS1Q92839 578 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 SLC5A5Q92911 643 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 GPRASP2Q96D09 838 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 C8orf76Q96K31 380 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 NSUN5Q96P11 429 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 MTMR9Q96QG7 549 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CTAGE1Q96RT6 745 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 PCYT2Q99447 389 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 MXRA8Q9BRK3 442 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 WDR11Q9BZH6 1224 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 GLT8D2Q9H1C3 349 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 TMEM60Q9H2L4 133 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 FOXP1Q9H334 677 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 RC3H2Q9HBD1 1191 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 AGO4Q9HCK5 861 aaKnown RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 C6orf50Q9HD87 102 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 KCNH7Q9NS40 1196 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 VAV3Q9UKW4 847 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CTDP1Q9Y5B0 961 aaPredicted RBP4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 CITO14578 2027 aa4.31□□□□□ -1.72
SMARCE1-215ENST00000578995 IGSF9BQ9UPX0 1349 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 TTC3P53804 2025 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 FAM95CA0A1B0GW59 222 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 GSTTP1A0A1W2PQM5 241 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 A6NJR5 290 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 RBAK-RBAKDNI3L0D1 243 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 HAS3O00219 553 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 MSH4O15457 936 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 FIBPO43427 364 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 PSMD10O75832 226 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 STBD1O95210 358 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 ATG7O95352 703 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 BRD1O95696 1058 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 MYCLP12524 364 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 AKR1A1P14550 325 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SOX18P35713 384 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 RGS19P49795 217 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 ARSDP51689 593 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 USP11P51784 963 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 AKAP17AQ02040 695 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SNX17Q15036 470 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 NONOQ15233 471 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 PTPAQ15257 358 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 LRRC41Q15345 812 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 NFKBIBQ15653 356 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 STXBP2Q15833 593 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 IL17AQ16552 155 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 LY6KQ17RY6 165 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 HSDL1Q3SXM5 330 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 CEP55Q53EZ4 464 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 CELF3Q5SZQ8 465 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 ANO1Q5XXA6 986 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 IQSEC1Q6DN90 963 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 FAM173BQ6P4H8 233 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 PIK3AP1Q6ZUJ8 805 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 NEK8Q86SG6 692 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 NOSTRINQ8IVI9 506 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 HSCBQ8IWL3 235 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 CCAR1Q8IX12 1150 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SLC43A3Q8NBI5 491 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 BICD2Q8TD16 824 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 UBASH3BQ8TF42 649 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 U2AF1L4Q8WU68 220 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SCFD2Q8WU76 684 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 KAT2BQ92831 832 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 GJA10Q969M2 543 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 CHAMP1Q96JM3 812 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 DEFB118Q96PH6 123 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 GPR20Q99678 358 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SENP7Q9BQF6 1050 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 C16orf70Q9BSU1 422 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 FTOQ9C0B1 505 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SLC5A4Q9NY91 659 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 RTEL1Q9NZ71 1219 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 ZC3H7BQ9UGR2 993 aaKnown RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 ZHX1Q9UKY1 873 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 SMC3Q9UQE7 1217 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 Q9Y3F1 56 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 PCDHB6Q9Y5E3 794 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 MRVI1Q9Y6F6 885 aa4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 MORC2Q9Y6X9 1032 aaPredicted RBP4.3□□□□□ -1.72
SMARCE1-215ENST00000578995 TDRD15B5MCY1 1934 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms