RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 DUSP6Q16828 381 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 NOMO2Q5JPE7 1267 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
LITAF-219ENST00000576334 MRPL10Q7Z7H8 261 aaKnown RBP13.22□□□□□ -0.29
LITAF-219ENST00000576334 FEZF2Q8TBJ5 459 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 CCDC43Q96MW1 224 aaKnown RBP13.22□□□□□ -0.29
LITAF-219ENST00000576334 APOL6Q9BWW8 343 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 VN1R3Q9BXE9 311 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 C11orf16Q9NQ32 467 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 ENTPD7Q9NQZ7 604 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 CD207Q9UJ71 328 aa13.22□□□□□ -0.29
LITAF-219ENST00000576334 GAS2O43903 313 aaKnown RBP13.21□□□□□ -0.29
LITAF-219ENST00000576334 ERLIN2O94905 339 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 EDN1P05305 212 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 GALTP07902 379 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 ARF4P18085 180 aaPredicted RBP13.21□□□□□ -0.29
LITAF-219ENST00000576334 GJB2P29033 226 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 SLC11A1P49279 550 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 PTGDRQ13258 359 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.29
LITAF-219ENST00000576334 MCTP1Q6DN14 999 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 GLB1LQ6UWU2 654 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 TMC7Q7Z402 723 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 EXOC8Q8IYI6 725 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 ZFP42Q96MM3 310 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 POLR3CQ9BUI4 534 aaPredicted RBP13.21□□□□□ -0.29
LITAF-219ENST00000576334 TUFT1Q9NNX1 390 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 MIOSQ9NXC5 875 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 IPPQ9Y573 584 aa13.21□□□□□ -0.29
LITAF-219ENST00000576334 LRRIQ4A6NIV6 560 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 F8W810 466 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 NCK2O43639 380 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 ST18O60284 1047 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 AKAP5P24588 427 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 RPA1P27694 616 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 CA8P35219 290 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 CCT6AP40227 531 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 ALDH7A1P49419 539 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 RAB27AP51159 221 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 RNASELQ05823 741 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 KCNC3Q14003 757 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 MXD4Q14582 209 aaPredicted RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 CSPP1Q1MSJ5 1256 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 KANK3Q6NY19 840 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 RABGGTAQ92696 567 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 TBC1D32Q96NH3 1257 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 MRPL9Q9BYD2 267 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 NXF3Q9H4D5 531 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 RSAD1Q9HA92 442 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 CACNG4Q9UBN1 327 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 LRWD1Q9UFC0 647 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 PUF60Q9UHX1 559 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 DBR1Q9UK59 544 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
LITAF-219ENST00000576334 LZTS1Q9Y250 596 aa13.2□□□□□ -0.3
LITAF-219ENST00000576334 C2orf71A6NGG8 1288 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 NPTXRO95502 500 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 EYA4O95677 639 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 SKIP12755 728 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 XRCC6P12956 609 aaKnown RBP eCLIP13.19□□□□□ -0.3
LITAF-219ENST00000576334 LIG1P18858 919 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 NCLP19338 710 aaKnown RBP13.19□□□□□ -0.3
LITAF-219ENST00000576334 COL9A1P20849 921 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 PPM1AP35813 382 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 MLH1P40692 756 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 FXR2P51116 673 aaKnown RBP eCLIP13.19□□□□□ -0.3
LITAF-219ENST00000576334 KRT17Q04695 432 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 SMAD4Q13485 552 aaKnown RBP13.19□□□□□ -0.3
LITAF-219ENST00000576334 TFDP1Q14186 410 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 PUS10Q3MIT2 529 aaKnown RBP13.19□□□□□ -0.3
LITAF-219ENST00000576334 IFNLR1Q8IU57 520 aaPredicted RBP13.19□□□□□ -0.3
LITAF-219ENST00000576334 ADHFE1Q8IWW8 467 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 VPS52Q8N1B4 723 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 SMRP1Q8NCR6 262 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 PGBD4Q96DM1 585 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 IGSF21Q96ID5 467 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 NACC1Q96RE7 527 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 GAD1Q99259 594 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 CSRNP2Q9H175 543 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 DDX19AQ9NUU7 478 aaKnown RBP13.19□□□□□ -0.3
LITAF-219ENST00000576334 KLK14Q9P0G3 267 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 KIAA1024Q9UPX6 916 aa13.19□□□□□ -0.3
LITAF-219ENST00000576334 USP15Q9Y4E8 981 aaPredicted RBP13.19□□□□□ -0.3
LITAF-219ENST00000576334 TDRD15B5MCY1 1934 aaKnown RBP13.18□□□□□ -0.3
LITAF-219ENST00000576334 ARHGEF35A5YM69 484 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 E9PMD0 336 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 PI4K2BG5E9Z4 385 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 CXCL14O95715 111 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 SSBP05455 408 aaKnown RBP eCLIP13.18□□□□□ -0.3
LITAF-219ENST00000576334 ITGA4P13612 1032 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 TRAPPC10P48553 1259 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 SCNN1GP51170 649 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 COASYQ13057 564 aa13.18□□□□□ -0.3
LITAF-219ENST00000576334 NOTUMQ6P988 496 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms