RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 TRAK2O60296 914 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 ZNF623O75123 536 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 PRKCBP05771 671 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 MAPTP10636 758 aaKnown RBP19.02■□□□□ 0.64
LITAF-212ENST00000573332 SKIP12755 728 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 GAP43P17677 238 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 ARF4P18085 180 aaPredicted RBP19.02■□□□□ 0.64
LITAF-212ENST00000573332 ABCD1P33897 745 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 RAB27AP51159 221 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 LONRF3Q496Y0 759 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 GPR153Q6NV75 609 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 NOTUMQ6P988 496 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 MYCT1Q8N699 235 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 SLC17A8Q8NDX2 589 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 PBX4Q9BYU1 374 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 ST6GALNAC4Q9H4F1 302 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 TMEM161AQ9NX61 479 aa19.02■□□□□ 0.64
LITAF-212ENST00000573332 MICAL3Q7RTP6 2002 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 SOX1O00570 391 aaPredicted RBP19.01■□□□□ 0.63
LITAF-212ENST00000573332 SLC16A4O15374 487 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 B4GALT5O43286 388 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 EOMESO95936 686 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 UBXN11Q5T124 520 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 TWF2Q6IBS0 349 aaKnown RBP19.01■□□□□ 0.63
LITAF-212ENST00000573332 TAS1R3Q7RTX0 852 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 ECHDC2Q86YB7 292 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 STAMQ92783 540 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 ZBED2Q9BTP6 218 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 OLFML3Q9NRN5 406 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 FAM105AQ9NUU6 356 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 INSL6Q9Y581 213 aa19.01■□□□□ 0.63
LITAF-212ENST00000573332 TLL1O43897 1013 aa19■□□□□ 0.63
LITAF-212ENST00000573332 DGKIO75912 1065 aa19■□□□□ 0.63
LITAF-212ENST00000573332 ZNF202O95125 648 aa19■□□□□ 0.63
LITAF-212ENST00000573332 MYL1P05976 194 aa19■□□□□ 0.63
LITAF-212ENST00000573332 RABGGTBP53611 331 aa19■□□□□ 0.63
LITAF-212ENST00000573332 PRPF4BQ13523 1007 aaKnown RBP19■□□□□ 0.63
LITAF-212ENST00000573332 HAUS6Q7Z4H7 955 aa19■□□□□ 0.63
LITAF-212ENST00000573332 TMCO2Q7Z6W1 182 aaPredicted RBP19■□□□□ 0.63
LITAF-212ENST00000573332 MRPL10Q7Z7H8 261 aaKnown RBP19■□□□□ 0.63
LITAF-212ENST00000573332 ZNF598Q86UK7 904 aaKnown RBP19■□□□□ 0.63
LITAF-212ENST00000573332 FAM178BQ8IXR5 827 aa19■□□□□ 0.63
LITAF-212ENST00000573332 CCDC65Q8IXS2 484 aa19■□□□□ 0.63
LITAF-212ENST00000573332 ENGASEQ8NFI3 743 aa19■□□□□ 0.63
LITAF-212ENST00000573332 SP7Q8TDD2 431 aaPredicted RBP19■□□□□ 0.63
LITAF-212ENST00000573332 ZNF689Q96CS4 500 aaPredicted RBP19■□□□□ 0.63
LITAF-212ENST00000573332 PAGE5Q96GU1 130 aa19■□□□□ 0.63
LITAF-212ENST00000573332 ZHX3Q9H4I2 956 aa19■□□□□ 0.63
LITAF-212ENST00000573332 RC3H2Q9HBD1 1191 aaKnown RBP19■□□□□ 0.63
LITAF-212ENST00000573332 MSRAQ9UJ68 235 aa19■□□□□ 0.63
LITAF-212ENST00000573332 PCDHB7Q9Y5E2 793 aa19■□□□□ 0.63
LITAF-212ENST00000573332 TRIOBPQ9H2D6 2365 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 TMEM265A0A087WTH1 108 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 UPP2O95045 317 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 EDN1P05305 212 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 DNAJB2P25686 324 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 PBX2P40425 430 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 FXR1P51114 621 aaKnown RBP eCLIP18.99■□□□□ 0.63
LITAF-212ENST00000573332 GTF2BQ00403 316 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 NT5DC1Q5TFE4 455 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 KRBA2Q6ZNG9 492 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 ZNF720Q7Z2F6 126 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 SFR1Q86XK3 245 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 FMR1NBQ8N0W7 255 aaPredicted RBP18.99■□□□□ 0.63
LITAF-212ENST00000573332 CNNM3Q8NE01 707 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 CPB2Q96IY4 423 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 PANK4Q9NVE7 773 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 LRFN2Q9ULH4 789 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 TNFSF13BQ9Y275 285 aa18.99■□□□□ 0.63
LITAF-212ENST00000573332 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
LITAF-212ENST00000573332 TTC3P53804 2025 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 PVALEFA0A1B0GWK0 134 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 TTLL13PA6NNM8 815 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 N4BP3O15049 544 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 HOXA2O43364 376 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 IDEP14735 1019 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 ATF7P17544 494 aaPredicted RBP18.98■□□□□ 0.63
LITAF-212ENST00000573332 AFMP43652 599 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 FAM160A1Q05DH4 1040 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 STRN3Q13033 797 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 SNW1Q13573 536 aaKnown RBP18.98■□□□□ 0.63
LITAF-212ENST00000573332 HERC4Q5GLZ8 1057 aaPredicted RBP18.98■□□□□ 0.63
LITAF-212ENST00000573332 KANK3Q6NY19 840 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 FAM117BQ6P1L5 589 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 SLC27A1Q6PCB7 646 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 RSPH1Q8WYR4 309 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 LRCH3Q96II8 777 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 STRA6Q9BX79 667 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 MRPL4Q9BYD3 311 aaKnown RBP18.98■□□□□ 0.63
LITAF-212ENST00000573332 PCDHB2Q9Y5E7 798 aa18.98■□□□□ 0.63
LITAF-212ENST00000573332 K7ENM7 598 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 PPP1R37O75864 691 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 NMT1P30419 496 aaKnown RBP18.97■□□□□ 0.63
LITAF-212ENST00000573332 ASIC1P78348 528 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 EHHADHQ08426 723 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 CUL4BQ13620 913 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 ZPBP2Q6X784 338 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 UNC13DQ70J99 1090 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 TIFAQ96CG3 184 aa18.97■□□□□ 0.63
LITAF-212ENST00000573332 HVCN1Q96D96 273 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms