RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 NUCB2P80303 420 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 PRPF4BQ13523 1007 aaKnown RBP15.39■□□□□ 0.05
RPAIN-211ENST00000572174 EPC2Q52LR7 807 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 SPOUT1Q5T280 376 aaKnown RBP15.39■□□□□ 0.05
RPAIN-211ENST00000572174 FOXD4L5Q5VV16 416 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-211ENST00000572174 RRAGBQ5VZM2 374 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 SLC27A1Q6PCB7 646 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 GPBP1Q86WP2 473 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 RNF169Q8NCN4 708 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 FOXD4L4Q8WXT5 416 aaPredicted RBP15.39■□□□□ 0.05
RPAIN-211ENST00000572174 P2RX5Q93086 422 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 PLIN2Q99541 437 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 RUSC1Q9BVN2 902 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 LMAN2LQ9H0V9 348 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 CUEDC2Q9H467 287 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 MINDY3Q9H8M7 445 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 KMT5AQ9NQR1 393 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 KANSL3Q9P2N6 904 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 PCDHB2Q9Y5E7 798 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 PLXNA4Q9HCM2 1894 aa15.39■□□□□ 0.05
RPAIN-211ENST00000572174 TRIP11Q15643 1979 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 K7ERI5 159 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 PRKCBP05771 671 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 PLS3P13797 630 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 NCLP19338 710 aaKnown RBP15.38■□□□□ 0.05
RPAIN-211ENST00000572174 IGFBP4P22692 258 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 DDIT3P35638 169 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 BMPR1AP36894 532 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 STAT6P42226 847 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 PEX3P56589 373 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 STRN3Q13033 797 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 KCNK18Q7Z418 384 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 ZNF598Q86UK7 904 aaKnown RBP15.38■□□□□ 0.05
RPAIN-211ENST00000572174 MAFAQ8NHW3 353 aaPredicted RBP15.38■□□□□ 0.05
RPAIN-211ENST00000572174 SPIRE2Q8WWL2 714 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 EPSTI1Q96J88 318 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 SCAND2PQ9GZW5 306 aaPredicted RBP15.38■□□□□ 0.05
RPAIN-211ENST00000572174 FZD8Q9H461 694 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 TMEM134Q9H6X4 195 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 MTUS1Q9ULD2 1270 aa15.38■□□□□ 0.05
RPAIN-211ENST00000572174 ATG2AQ2TAZ0 1938 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 A0A1B0GUA9 196 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 H3BNC9 293 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 ACKR2O00590 384 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 FAM13AO94988 1023 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 ARF4P18085 180 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-211ENST00000572174 HOXA11P31270 313 aaPredicted RBP15.37■□□□□ 0.05
RPAIN-211ENST00000572174 NPTX2P47972 431 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 ME1P48163 572 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 GRIN1Q05586 938 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 DCAF4L1Q3SXM0 396 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 PAN2Q504Q3 1202 aaKnown RBP15.37■□□□□ 0.05
RPAIN-211ENST00000572174 TIGD5Q53EQ6 642 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 SV2BQ7L1I2 683 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 BSNDQ8WZ55 320 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 CLIC6Q96NY7 704 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 C17orf80Q9BSJ5 609 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 MRPL4Q9BYD3 311 aaKnown RBP15.37■□□□□ 0.05
RPAIN-211ENST00000572174 CERS4Q9HA82 394 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 MAGEF1Q9HAY2 307 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 PARVGQ9HBI0 331 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 FAM13BQ9NYF5 915 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 ARHGAP28Q9P2N2 729 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 TFIP11Q9UBB9 837 aaKnown RBP15.37■□□□□ 0.05
RPAIN-211ENST00000572174 STK39Q9UEW8 545 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 MRPL42Q9Y6G3 142 aaKnown RBP15.37■□□□□ 0.05
RPAIN-211ENST00000572174 CHD9Q3L8U1 2897 aa15.37■□□□□ 0.05
RPAIN-211ENST00000572174 TRANK1O15050 2925 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 FGFR1P11362 822 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 ITGA4P13612 1032 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 ATF7P17544 494 aaPredicted RBP15.36■□□□□ 0.05
RPAIN-211ENST00000572174 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
RPAIN-211ENST00000572174 AMPD3Q01432 767 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 UBE3AQ05086 875 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 MAPK7Q13164 816 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 GPM6BQ13491 265 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 PKP1Q13835 747 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 MRPL10Q7Z7H8 261 aaKnown RBP15.36■□□□□ 0.05
RPAIN-211ENST00000572174 PPP2R3CQ969Q6 453 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 NTPCRQ9BSD7 190 aaKnown RBP15.36■□□□□ 0.05
RPAIN-211ENST00000572174 CCDC113Q9H0I3 377 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 RSAD1Q9HA92 442 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 BLOC1S4Q9NUP1 217 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 SEL1LQ9UBV2 794 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 CHD7Q9P2D1 2997 aa15.36■□□□□ 0.05
RPAIN-211ENST00000572174 PDCD11Q14690 1871 aaKnown RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 FSD2A1L4K1 749 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 ARHGEF15O94989 841 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 DNM1Q05193 864 aaKnown RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 RNASELQ05823 741 aaKnown RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 DHX8Q14562 1220 aaKnown RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 MCM6Q14566 821 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 BMS1Q14692 1282 aaKnown RBP15.35■□□□□ 0.05
RPAIN-211ENST00000572174 AMHR2Q16671 573 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 NOMO2Q5JPE7 1267 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 SPECC1Q5M775 1068 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 DAW1Q8N136 415 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 IQUBQ8NA54 791 aa15.35■□□□□ 0.05
RPAIN-211ENST00000572174 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms