RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 RASSF8Q8NHQ8 419 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 KIFAP3Q92845 792 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 DHX58Q96C10 678 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 RAD9AQ99638 391 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 C17orf80Q9BSJ5 609 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 ZNF576Q9H609 170 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 FAM105AQ9NUU6 356 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 STK17AQ9UEE5 414 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 CFAP45Q9UL16 551 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 HPSEQ9Y251 543 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 HES2Q9Y543 173 aa7.72□□□□□ -1.17
SMG6-209ENST00000571442 RALGAPA2Q2PPJ7 1873 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PLXNA4Q9HCM2 1894 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 EYSQ5T1H1 3165 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 A0A0U1RQF3 1178 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 FAM237AA0A1B0GTK4 181 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 CCDC169A6NNP5 214 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 MEFVO15553 781 aaPredicted RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 ACTN4O43707 911 aaKnown RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 LPXNO60711 386 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PRKCBP05771 671 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PLS3P13797 630 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 NMT1P30419 496 aaKnown RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 NDUFA8P51970 172 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 TFDP1Q14186 410 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 RAB30Q15771 203 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 FAM187BQ17R55 369 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PPP2R2DQ66LE6 453 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 ADALQ6DHV7 355 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 TWF2Q6IBS0 349 aaKnown RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 AGMOQ6ZNB7 445 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 CCDC73Q6ZRK6 1079 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 SFR1Q86XK3 245 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 ZNF710Q8N1W2 664 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 KCTD17Q8N5Z5 321 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 RNF169Q8NCN4 708 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 TMEM161BQ8NDZ6 487 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 GLIS3Q8NEA6 775 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 MAFAQ8NHW3 353 aaPredicted RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 DEPTORQ8TB45 409 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 DDX12PQ92771 950 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 HPS3Q969F9 1004 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 ZBTB45Q96K62 511 aaPredicted RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 CASD1Q96PB1 797 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 YME1L1Q96TA2 773 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 CDX2Q99626 313 aaPredicted RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 NTPCRQ9BSD7 190 aaKnown RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 ZBED2Q9BTP6 218 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 HAPLN2Q9GZV7 340 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 BLZF1Q9H2G9 400 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 NXF3Q9H4D5 531 aaKnown RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PDZD7Q9H5P4 517 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 KMT5AQ9NQR1 393 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 CHST12Q9NRB3 414 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 C1orf112Q9NSG2 853 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 KBTBD4Q9NVX7 518 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 TMEM161AQ9NX61 479 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 CCDC39Q9UFE4 941 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 SERTAD1Q9UHV2 236 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 MSRAQ9UJ68 235 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 MTUS1Q9ULD2 1270 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PCDHB7Q9Y5E2 793 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PCDHB2Q9Y5E7 798 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 MRPL42Q9Y6G3 142 aaKnown RBP7.71□□□□□ -1.18
SMG6-209ENST00000571442 CNTNAP2Q9UHC6 1331 aa7.71□□□□□ -1.18
SMG6-209ENST00000571442 PRUNE2Q8WUY3 3088 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 VCANP13611 3396 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 A0A1B0GUA9 196 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 FRMD3A2A2Y4 597 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 TBKBP1A7MCY6 615 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 TISP43B9A030 160 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 ACKR2O00590 384 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 ZNF623O75123 536 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 GADD45BO75293 160 aaPredicted RBP7.7□□□□□ -1.18
SMG6-209ENST00000571442 OFD1O75665 1012 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 ERLIN2O94905 339 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 FAM13AO94988 1023 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 NPTXRO95502 500 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 PRR29P0C7W0 189 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 MAPTP10636 758 aaKnown RBP7.7□□□□□ -1.18
SMG6-209ENST00000571442 FOSL2P15408 326 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
SMG6-209ENST00000571442 CMA1P23946 247 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 TXLNAP40222 546 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 PBX3P40426 434 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 CASP5P51878 434 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 NCKAP1LP55160 1127 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 KCNA1Q09470 495 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
SMG6-209ENST00000571442 CUL4BQ13620 913 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 ZC2HC1CQ53FD0 456 aaPredicted RBP7.7□□□□□ -1.18
SMG6-209ENST00000571442 ODR4Q5SWX8 454 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 SLC39A4Q6P5W5 647 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 SV2BQ7L1I2 683 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 MRPL10Q7Z7H8 261 aaKnown RBP7.7□□□□□ -1.18
SMG6-209ENST00000571442 ZBTB8OSQ8IWT0 167 aa7.7□□□□□ -1.18
SMG6-209ENST00000571442 TMEM192Q8IY95 271 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms