RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 LAMTOR4Q0VGL1 99 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 EMC2Q15006 297 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 TMEM173Q86WV6 379 aaPredicted RBP15.25■□□□□ 0.03
CNOT1-215ENST00000569020 RNF149Q8NC42 400 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 AUTS2Q8WXX7 1259 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 DYDC2Q96IM9 177 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 FAM193BQ96PV7 902 aaPredicted RBP15.25■□□□□ 0.03
CNOT1-215ENST00000569020 MTRQ99707 1265 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 ZSWIM4Q9H7M6 989 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 RSAD1Q9HA92 442 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 DZANK1Q9NVP4 752 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 RGL1Q9NZL6 768 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 KANSL3Q9P2N6 904 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 DNAJB4Q9UDY4 337 aa15.25■□□□□ 0.03
CNOT1-215ENST00000569020 SLC11A1P49279 550 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 ANAPC15P60006 121 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 CYP4A11Q02928 519 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 CTTNQ14247 550 aaKnown RBP15.24■□□□□ 0.03
CNOT1-215ENST00000569020 RARS2Q5T160 578 aaKnown RBP15.24■□□□□ 0.03
CNOT1-215ENST00000569020 AGMOQ6ZNB7 445 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 MRPL10Q7Z7H8 261 aaKnown RBP15.24■□□□□ 0.03
CNOT1-215ENST00000569020 FERMT3Q86UX7 667 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 PPFIBP1Q86W92 1011 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 ZNF280BQ86YH2 543 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 TPH2Q8IWU9 490 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 CNNM3Q8NE01 707 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 ASIC4Q96FT7 647 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 MINDY3Q9H8M7 445 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 CDH22Q9UJ99 828 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 DENND4AQ7Z401 1863 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 MYO10Q9HD67 2058 aa15.24■□□□□ 0.03
CNOT1-215ENST00000569020 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 DTNBO60941 627 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 DDHD2O94830 711 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 CTDNEP1O95476 244 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 ALDH2P05091 517 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 NCLP19338 710 aaKnown RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 AXLP30530 894 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 HOXA11P31270 313 aaPredicted RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 AK2P54819 239 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 PTPN5P54829 565 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 SPIRE1Q08AE8 756 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 NCBP1Q09161 790 aaKnown RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 PCBP1Q15365 356 aaKnown RBP eCLIP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 EARS2Q5JPH6 523 aaKnown RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 ATAT1Q5SQI0 421 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 KIAA1841Q6NSI8 718 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 BCL7CQ8WUZ0 217 aaPredicted RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 TMEM175Q9BSA9 504 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 EMILIN2Q9BXX0 1053 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 UBN1Q9NPG3 1134 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 DBR1Q9UK59 544 aaKnown RBP15.23■□□□□ 0.03
CNOT1-215ENST00000569020 PCDHA12Q9UN75 941 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 SORCS3Q9UPU3 1222 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 FAN1Q9Y2M0 1017 aa15.23■□□□□ 0.03
CNOT1-215ENST00000569020 C2orf16Q68DN1 1984 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 C2CD4DB7Z1M9 353 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 SLITRK3O94933 977 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 CENPBP07199 599 aaPredicted RBP15.22■□□□□ 0.03
CNOT1-215ENST00000569020 ITGA4P13612 1032 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 EPCAMP16422 314 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 NR5A1Q13285 461 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 MTMR3Q13615 1198 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 TFDP1Q14186 410 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 UBXN11Q5T124 520 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 IER5LQ5T953 404 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 CABP7Q86V35 215 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 KREMEN2Q8NCW0 462 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 PRSS33Q8NF86 280 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 SLC22A17Q8WUG5 538 aa15.22■□□□□ 0.03
CNOT1-215ENST00000569020 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
CNOT1-215ENST00000569020 EIF2AK1Q9BQI3 630 aaKnown RBP15.22■□□□□ 0.03
CNOT1-215ENST00000569020 FAM205CA6NFA0 338 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 NRP1O14786 923 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 ZBTB39O15060 712 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 DGAT1O75907 488 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 POMCP01189 267 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 SSBP05455 408 aaKnown RBP eCLIP15.21■□□□□ 0.03
CNOT1-215ENST00000569020 WEE2P0C1S8 567 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 FDPSP14324 419 aaKnown RBP15.21■□□□□ 0.03
CNOT1-215ENST00000569020 KLRC2P26717 231 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 CALCRLQ16602 461 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 ERICH6BQ5W0A0 696 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 NOTUMQ6P988 496 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 UBALD2Q8IYN6 164 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 C12orf76Q8N812 135 aaPredicted RBP15.21■□□□□ 0.03
CNOT1-215ENST00000569020 TDRD5Q8NAT2 981 aaKnown RBP15.21■□□□□ 0.03
CNOT1-215ENST00000569020 TNFRSF25Q93038 417 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 SFXN1Q9H9B4 322 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 MRPL17Q9NRX2 175 aaKnown RBP15.21■□□□□ 0.03
CNOT1-215ENST00000569020 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 IPPQ9Y573 584 aa15.21■□□□□ 0.03
CNOT1-215ENST00000569020 PLXNA3P51805 1871 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 INO80B-WBP1J3KQ70 363 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 B4GALT3O60512 393 aa15.2■□□□□ 0.02
CNOT1-215ENST00000569020 TSPAN1O60635 241 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms