RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 DHX33Q9H6R0 707 aaKnown RBP13.33□□□□□ -0.28
UBR1-206ENST00000566493 IFT122Q9HBG6 1241 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 TBC1D13Q9NVG8 400 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 RGL1Q9NZL6 768 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 NR2E1Q9Y466 385 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 PCDHB2Q9Y5E7 798 aa13.33□□□□□ -0.28
UBR1-206ENST00000566493 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 DTNBO60941 627 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 CLASP2O75122 1294 aaKnown RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 OFD1O75665 1012 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 CTDNEP1O95476 244 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 GALTP07902 379 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 CHRM1P11229 460 aaPredicted RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 CYP4A11Q02928 519 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 ITIH3Q06033 890 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 NCBP1Q09161 790 aaKnown RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 NR5A1Q13285 461 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 TRIM29Q14134 588 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 CTTNQ14247 550 aaKnown RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 EMC2Q15006 297 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 ZBTB33Q86T24 672 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 DDX53Q86TM3 631 aaKnown RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 TPH2Q8IWU9 490 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 IGSF21Q96ID5 467 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 CCDC43Q96MW1 224 aaKnown RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 NECTIN4Q96NY8 510 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 MTRQ99707 1265 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 NRDE2Q9H7Z3 1164 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 KANSL3Q9P2N6 904 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 WRAP73Q9P2S5 460 aaPredicted RBP13.32□□□□□ -0.28
UBR1-206ENST00000566493 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 HCFC2Q9Y5Z7 792 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 CNTNAP2Q9UHC6 1331 aa13.32□□□□□ -0.28
UBR1-206ENST00000566493 MEIS3P2A8K0S8 358 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 ERLIN2O94905 339 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 ALDH2P05091 517 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 CTSAP10619 480 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 TFDP1Q14186 410 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 MXD4Q14582 209 aaPredicted RBP13.31□□□□□ -0.28
UBR1-206ENST00000566493 CALCRLQ16602 461 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 EARS2Q5JPH6 523 aaKnown RBP13.31□□□□□ -0.28
UBR1-206ENST00000566493 BMP8AQ7Z5Y6 402 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 FERMT3Q86UX7 667 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 SUGP1Q8IWZ8 645 aaKnown RBP13.31□□□□□ -0.28
UBR1-206ENST00000566493 RNF149Q8NC42 400 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 CNNM3Q8NE01 707 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 GTF3C6Q969F1 213 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 FBXL18Q96ME1 805 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 RIPOR3Q96MK2 946 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 ZBP1Q9H171 429 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 ADAM7Q9H2U9 754 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 RSAD1Q9HA92 442 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 DZANK1Q9NVP4 752 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 PPP4R2Q9NY27 417 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 STK39Q9UEW8 545 aa13.31□□□□□ -0.28
UBR1-206ENST00000566493 ARID2Q68CP9 1835 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 SLITRK3O94933 977 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 FDPSP14324 419 aaKnown RBP13.3□□□□□ -0.28
UBR1-206ENST00000566493 SP100P23497 879 aaPredicted RBP13.3□□□□□ -0.28
UBR1-206ENST00000566493 MTHFRP42898 656 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 SIGLEC14Q08ET2 396 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 PCBP1Q15365 356 aaKnown RBP eCLIP13.3□□□□□ -0.28
UBR1-206ENST00000566493 ME3Q16798 604 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 PTPN21Q16825 1174 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 AGMOQ6ZNB7 445 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 MRPL10Q7Z7H8 261 aaKnown RBP13.3□□□□□ -0.28
UBR1-206ENST00000566493 PPFIBP1Q86W92 1011 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 TMEM173Q86WV6 379 aaPredicted RBP13.3□□□□□ -0.28
UBR1-206ENST00000566493 AUTS2Q8WXX7 1259 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 EIF2AK1Q9BQI3 630 aaKnown RBP13.3□□□□□ -0.28
UBR1-206ENST00000566493 MINDY3Q9H8M7 445 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 UBN1Q9NPG3 1134 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 IRAK3Q9Y616 596 aa13.3□□□□□ -0.28
UBR1-206ENST00000566493 ZBTB39O15060 712 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 NEMFO60524 1076 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 ITGA4P13612 1032 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 AXLP30530 894 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 HOXA11P31270 313 aaPredicted RBP13.29□□□□□ -0.28
UBR1-206ENST00000566493 TXKP42681 527 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 SLC11A1P49279 550 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 NEK4P51957 841 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 SPIRE1Q08AE8 756 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 ATAT1Q5SQI0 421 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 RARS2Q5T160 578 aaKnown RBP13.29□□□□□ -0.28
UBR1-206ENST00000566493 NOTUMQ6P988 496 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 ALYREFQ86V81 257 aaKnown RBP13.29□□□□□ -0.28
UBR1-206ENST00000566493 ZNF280BQ86YH2 543 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 HACE1Q8IYU2 909 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 TNFRSF25Q93038 417 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 CCDC51Q96ER9 411 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 TMEM175Q9BSA9 504 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 EMILIN2Q9BXX0 1053 aa13.29□□□□□ -0.28
UBR1-206ENST00000566493 TTC12Q9H892 705 aaPredicted RBP13.29□□□□□ -0.28
UBR1-206ENST00000566493 ANKEF1Q9NU02 776 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms