RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 RNF149Q8NC42 400 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 CASP10Q92851 521 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 NRDE2Q9H7Z3 1164 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 ENTPD7Q9NQZ7 604 aa16.9■□□□□ 0.3
CMTM3-212ENST00000566121 USP15Q9Y4E8 981 aaPredicted RBP16.9■□□□□ 0.3
CMTM3-212ENST00000566121 HIDE1A8MVS5 230 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 ZBTB39O15060 712 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 SRGAP2CP0DJJ0 459 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 SPATA31C1P0DKV0 1188 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 CTSAP10619 480 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 ITIH3Q06033 890 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 NOTUMQ6P988 496 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 SYCE2Q6PIF2 218 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 RNF135Q8IUD6 432 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 RNF169Q8NCN4 708 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 NACC1Q96RE7 527 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 KIF2CQ99661 725 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 ZBP1Q9H171 429 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 HCN4Q9Y3Q4 1203 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 PCDHGC5Q9Y5F6 944 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
CMTM3-212ENST00000566121 PER2O15055 1255 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 ALDH2P05091 517 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-212ENST00000566121 RPA1P27694 616 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 PLA2G5P39877 138 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 TXKP42681 527 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 CYP4A11Q02928 519 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 PDIA5Q14554 519 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 AMHR2Q16671 573 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 FAM187BQ17R55 369 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 TPRNQ4KMQ1 711 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 PPFIBP1Q86W92 1011 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 MCPH1Q8NEM0 835 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 URGCPQ8TCY9 931 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 EDAQ92838 391 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 C8orf76Q96K31 380 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 PRIMPOLQ96LW4 560 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 NECTIN4Q96NY8 510 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 RSAD1Q9HA92 442 aa16.88■□□□□ 0.29
CMTM3-212ENST00000566121 BARX2Q9UMQ3 279 aaPredicted RBP16.88■□□□□ 0.29
CMTM3-212ENST00000566121 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 WNT7AO00755 349 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 TSPAN1O60635 241 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 LILRB3O75022 631 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 CXCL14O95715 111 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 EFEMP2O95967 443 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 IBSPP21815 317 aaPredicted RBP16.87■□□□□ 0.29
CMTM3-212ENST00000566121 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
CMTM3-212ENST00000566121 CLUL1Q15846 466 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 PLPP4Q5VZY2 271 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 PPP4R3CPQ6ZMV5 832 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 CATSPER3Q86XQ3 398 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 SMG8Q8ND04 991 aaKnown RBP16.87■□□□□ 0.29
CMTM3-212ENST00000566121 RHOBTB2Q9BYZ6 727 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 CSRNP2Q9H175 543 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 TMEM60Q9H2L4 133 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 ADAM7Q9H2U9 754 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 DZANK1Q9NVP4 752 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 GIT1Q9Y2X7 761 aa16.87■□□□□ 0.29
CMTM3-212ENST00000566121 CLASP2O75122 1294 aaKnown RBP16.86■□□□□ 0.29
CMTM3-212ENST00000566121 ERLIN2O94905 339 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 PAPLNO95428 1278 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 GLRA2P23416 452 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 MBTD1Q05BQ5 628 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 CAPSQ13938 189 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 CDCA2Q69YH5 1023 aaPredicted RBP16.86■□□□□ 0.29
CMTM3-212ENST00000566121 NOSTRINQ8IVI9 506 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 VPS52Q8N1B4 723 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 KCTD17Q8N5Z5 321 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 C4orf32Q8N8J7 132 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 ERMNQ8TAM6 284 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 LPPQ93052 612 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 FZD8Q9H461 694 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 SSX2IPQ9Y2D8 614 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 HCFC2Q9Y5Z7 792 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 TECTAO75443 2155 aa16.86■□□□□ 0.29
CMTM3-212ENST00000566121 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 ZDBF2Q9HCK1 2354 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 MEIS3P2A8K0S8 358 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 ZC3H11AO75152 810 aaKnown RBP eCLIP16.85■□□□□ 0.29
CMTM3-212ENST00000566121 PBX3P40426 434 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 TECP42680 631 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 SLC11A1P49279 550 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
CMTM3-212ENST00000566121 RNASELQ05823 741 aaKnown RBP16.85■□□□□ 0.29
CMTM3-212ENST00000566121 DSC1Q08554 894 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 HACE1Q8IYU2 909 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
CMTM3-212ENST00000566121 ASAP3Q8TDY4 903 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 SLC22A17Q8WUG5 538 aa16.85■□□□□ 0.29
CMTM3-212ENST00000566121 LAD1O00515 517 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 DDHD2O94830 711 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 OR52Z1P0C646 297 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 ITGA4P13612 1032 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 C8orf34Q49A92 452 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 CYP26C1Q6V0L0 522 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 TMEM173Q86WV6 379 aaPredicted RBP16.84■□□□□ 0.29
CMTM3-212ENST00000566121 ZNF280BQ86YH2 543 aa16.84■□□□□ 0.29
CMTM3-212ENST00000566121 CCDC83Q8IWF9 413 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms