RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 C16orf70Q9BSU1 422 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 FGFBP2Q9BYJ0 223 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 IRX2Q9BZI1 471 aaPredicted RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 KCTD10Q9H3F6 313 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 TUT1Q9H6E5 874 aaKnown RBP10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 PDE11AQ9HCR9 933 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 POLD4Q9HCU8 107 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 XPNPEP1Q9NQW7 623 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 COL1A2P08123 1366 aa10.29□□□□□ -0.76
CNEP1R1-206ENST00000565556 K7ENM7 598 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 MAGEB2O15479 319 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 ADCY6O43306 1168 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 KPNA6O60684 536 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 HSPA6P17066 643 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 EEF1GP26641 437 aaKnown RBP10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 CASP14P31944 242 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 ACTN2P35609 894 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 NCKAP1LP55160 1127 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 PEX3P56589 373 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 ZCWPW2Q504Y3 356 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 HSP90B2PQ58FF3 399 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 IER5Q5VY09 327 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 HAUS6Q7Z4H7 955 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 NELFCDQ8IXH7 590 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 FAM71BQ8TC56 605 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 RAET1EQ8TD07 263 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 PXYLP1Q8TE99 480 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 CPLX3Q8WVH0 158 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 CEP63Q96MT8 703 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 PNKPQ96T60 521 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 STRA6Q9BX79 667 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 POLR3FQ9H1D9 316 aaPredicted RBP10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 RNF39Q9H2S5 420 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 TMEM206Q9H813 350 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 SPC25Q9HBM1 224 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 GPRC5CQ9NQ84 441 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 KMT5AQ9NQR1 393 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 TYW1Q9NV66 732 aaKnown RBP10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 VPS18Q9P253 973 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 LIMA1Q9UHB6 759 aaKnown RBP10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 FEZ2Q9UHY8 353 aaPredicted RBP10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 TRAF3IP3Q9Y228 551 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 KAT6AQ92794 2004 aa10.28□□□□□ -0.76
CNEP1R1-206ENST00000565556 LRRC10BA6NIK2 292 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 CCDC169A6NNP5 214 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 ZBTB42B2RXF5 422 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 KCNJ18B7U540 433 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 SEPT4O43236 478 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 ADCY3O60266 1144 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 RPS6KA5O75582 802 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 PPP1R37O75864 691 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 PRPF6O94906 941 aaKnown RBP10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 GNA14O95837 355 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 HMGCRP04035 888 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 MCM3P25205 808 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 RPL13P26373 211 aaKnown RBP10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 ARL2P36404 184 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 NAMPTP43490 491 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 NPTX2P47972 431 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 DNM2P50570 870 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 SNRPFP62306 86 aaKnown RBP10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 GTF2BQ00403 316 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 CACNB2Q08289 660 aaPredicted RBP10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 KCNJ12Q14500 433 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 TCP11X2Q5H9J9 407 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 RETREG2Q8NC44 543 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 TRPV1Q8NER1 839 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 ACCSQ96QU6 501 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 RNPEPQ9H4A4 650 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 MED4Q9NPJ6 270 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 ABHD10Q9NUJ1 306 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 EXOC7Q9UPT5 735 aa10.27□□□□□ -0.76
CNEP1R1-206ENST00000565556 IGKV6-21A0A0C4DH24 114 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 RRN3P2A6NIE6 340 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 N4BP3O15049 544 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 SLC16A4O15374 487 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZEB2O60315 1214 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZNF286BP0CG31 522 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 RARBP10826 455 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 INSRRP14616 1297 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 CNGA1P29973 690 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 HOXD13P35453 343 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 FXR1P51114 621 aaKnown RBP eCLIP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 GJA9P57773 515 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 NKX3-2P78367 333 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 CAP1Q01518 475 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 MXD4Q14582 209 aaPredicted RBP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 KRT31Q15323 416 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 NFIL3Q16649 462 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 FSCN1Q16658 493 aaKnown RBP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZC2HC1CQ53FD0 456 aaPredicted RBP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 HS2ST1Q7LGA3 356 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 IRF2BP1Q8IU81 584 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZC3H3Q8IXZ2 948 aaKnown RBP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 SYCP3Q8IZU3 236 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 TMEM161BQ8NDZ6 487 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ACRBPQ8NEB7 543 aa10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 ZNF296Q8WUU4 475 aaPredicted RBP10.27□□□□□ -0.77
CNEP1R1-206ENST00000565556 KCNN1Q92952 543 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms