RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 BMP8AQ7Z5Y6 402 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 SRGAP1Q7Z6B7 1085 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 PSPC1Q8WXF1 523 aaKnown RBP21.1■□□□□ 0.97
SPSB3-207ENST00000565550 AUTS2Q8WXX7 1259 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 PBXIP1Q96AQ6 731 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 PGBD4Q96DM1 585 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 DYDC2Q96IM9 177 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 MINDY3Q9H8M7 445 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 CDH22Q9UJ99 828 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 PCDHB2Q9Y5E7 798 aa21.1■□□□□ 0.97
SPSB3-207ENST00000565550 ZBTB39O15060 712 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 BAG4O95429 457 aaKnown RBP21.09■□□□□ 0.97
SPSB3-207ENST00000565550 CYP4A11Q02928 519 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 RNASELQ05823 741 aaKnown RBP21.09■□□□□ 0.97
SPSB3-207ENST00000565550 SPIRE1Q08AE8 756 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 LAMTOR4Q0VGL1 99 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 NBR1Q14596 966 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 SAFBQ15424 915 aaKnown RBP eCLIP21.09■□□□□ 0.97
SPSB3-207ENST00000565550 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 XKR9Q5GH70 373 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 ALYREFQ86V81 257 aaKnown RBP21.09■□□□□ 0.97
SPSB3-207ENST00000565550 BCL7CQ8WUZ0 217 aaPredicted RBP21.09■□□□□ 0.97
SPSB3-207ENST00000565550 IGSF21Q96ID5 467 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 GBP3Q9H0R5 595 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 ZBP1Q9H171 429 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 ZSWIM4Q9H7M6 989 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 DNAJB4Q9UDY4 337 aa21.09■□□□□ 0.97
SPSB3-207ENST00000565550 SP100P23497 879 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-207ENST00000565550 HOXA11P31270 313 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-207ENST00000565550 AGMOQ6ZNB7 445 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 MRPL10Q7Z7H8 261 aaKnown RBP21.08■□□□□ 0.97
SPSB3-207ENST00000565550 DDX53Q86TM3 631 aaKnown RBP21.08■□□□□ 0.97
SPSB3-207ENST00000565550 ZNF280BQ86YH2 543 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 TPH2Q8IWU9 490 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 SLFN12Q8IYM2 578 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 TMEM87AQ8NBN3 555 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 TCP11Q8WWU5 503 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 ADAM7Q9H2U9 754 aa21.08■□□□□ 0.97
SPSB3-207ENST00000565550 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.08■□□□□ 0.97
SPSB3-207ENST00000565550 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.07■□□□□ 0.96
SPSB3-207ENST00000565550 CARNS1A5YM72 827 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 ASAP2O43150 1006 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 B4GALT3O60512 393 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 SLITRK3O94933 977 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 CTSAP10619 480 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 SLC11A1P49279 550 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 NHLH1Q02575 133 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 EMC2Q15006 297 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 UBXN11Q5T124 520 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 CES5AQ6NT32 575 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 FERMT3Q86UX7 667 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 RNF149Q8NC42 400 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 FOXP1Q9H334 677 aaPredicted RBP21.07■□□□□ 0.96
SPSB3-207ENST00000565550 IRAK3Q9Y616 596 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 MYH15Q9Y2K3 1946 aa21.07■□□□□ 0.96
SPSB3-207ENST00000565550 GAS2O43903 313 aaKnown RBP21.06■□□□□ 0.96
SPSB3-207ENST00000565550 DDHD2O94830 711 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 AFF1P51825 1210 aaKnown RBP21.06■□□□□ 0.96
SPSB3-207ENST00000565550 ITIH3Q06033 890 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 GNL2Q13823 731 aaKnown RBP21.06■□□□□ 0.96
SPSB3-207ENST00000565550 PTPN21Q16825 1174 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 MCTP1Q6DN14 999 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 NOSTRINQ8IVI9 506 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 C12orf76Q8N812 135 aaPredicted RBP21.06■□□□□ 0.96
SPSB3-207ENST00000565550 URGCPQ8TCY9 931 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 SNX21Q969T3 373 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 MTRQ99707 1265 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 POMKQ9H5K3 350 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 RSAD1Q9HA92 442 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 TSHZ2Q9NRE2 1034 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 ARID2Q68CP9 1835 aa21.06■□□□□ 0.96
SPSB3-207ENST00000565550 TRIOO75962 3097 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 WEE2P0C1S8 567 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 EPCAMP16422 314 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 SIGLEC14Q08ET2 396 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 GIT2Q14161 759 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 RARS2Q5T160 578 aaKnown RBP21.05■□□□□ 0.96
SPSB3-207ENST00000565550 KANK3Q6NY19 840 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 EIF2AK1Q9BQI3 630 aaKnown RBP21.05■□□□□ 0.96
SPSB3-207ENST00000565550 VN1R3Q9BXE9 311 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 TMEM60Q9H2L4 133 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 XPNPEP1Q9NQW7 623 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 KANSL3Q9P2N6 904 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 PCDHA12Q9UN75 941 aa21.05■□□□□ 0.96
SPSB3-207ENST00000565550 POMCP01189 267 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 ALDH2P05091 517 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 U2AF2P26368 475 aaKnown RBP eCLIP21.04■□□□□ 0.96
SPSB3-207ENST00000565550 MCM7P33993 719 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 TOB1P50616 345 aaPredicted RBP21.04■□□□□ 0.96
SPSB3-207ENST00000565550 ZNF174Q15697 407 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 CALCRLQ16602 461 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 IER5LQ5T953 404 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 LARP1BQ659C4 914 aaKnown RBP21.04■□□□□ 0.96
SPSB3-207ENST00000565550 ZBTB33Q86T24 672 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 SUGP1Q8IWZ8 645 aaKnown RBP21.04■□□□□ 0.96
SPSB3-207ENST00000565550 SLC22A17Q8WUG5 538 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 NECTIN4Q96NY8 510 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 FAM193BQ96PV7 902 aaPredicted RBP21.04■□□□□ 0.96
SPSB3-207ENST00000565550 HSD17B14Q9BPX1 270 aa21.04■□□□□ 0.96
SPSB3-207ENST00000565550 NR2E1Q9Y466 385 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms