RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 USP28Q96RU2 1077 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 MXRA8Q9BRK3 442 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 WDR11Q9BZH6 1224 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 FTOQ9C0B1 505 aaKnown RBP eCLIP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 TMEM60Q9H2L4 133 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 ZSCAN16Q9H4T2 348 aaPredicted RBP5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 EHMT1Q9H9B1 1298 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 VTA1Q9NP79 307 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 NPHS2Q9NP85 383 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 JADE2Q9NQC1 790 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 PDGFCQ9NRA1 345 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 SLC5A4Q9NY91 659 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 CHMP5Q9NZZ3 219 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 PTPN22Q9Y2R2 807 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 LRRC37A2A6NM11 1700 aa5.88□□□□□ -1.47
HERPUD1-207ENST00000563781 ADCY6O43306 1168 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ATP9AO75110 1047 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 STAM2O75886 525 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 HMGCRP04035 888 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ARP10275 920 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 CYBAP13498 195 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 GCFC2P16383 781 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 PTGS1P23219 599 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 GRK4P32298 578 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ICAM3P32942 547 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ADCYAP1R1P41586 468 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 GSK3AP49840 483 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ST13P50502 369 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 CACNB2Q08289 660 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 KCNMA1Q12791 1236 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ITGB3BPQ13352 177 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ACVR2BQ13705 512 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 BMS1Q14692 1282 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 PTPAQ15257 358 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ZNF174Q15697 407 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 STXBP2Q15833 593 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 Q4G0T1 1027 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 RILPL1Q5EBL4 403 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 TTC38Q5R3I4 469 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 MFSD14CQ5VZR4 134 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 FBXO46Q6PJ61 603 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 EEPD1Q7L9B9 569 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 WFDC8Q8IUA0 241 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 DMRTC2Q8IXT2 367 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 IL22RA1Q8N6P7 574 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 C4orf32Q8N8J7 132 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ETNPPLQ8TBG4 499 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 EPS8L3Q8TE67 593 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 SH3TC2Q8TF17 1288 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 GPRASP2Q96D09 838 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.87□□□□□ -1.473e-9■■□□□ 14
HERPUD1-207ENST00000563781 ADAM19Q9H013 955 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ABHD16BQ9H3Z7 469 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 BCAS3Q9H6U6 928 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 KCNMB3Q9NPA1 279 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 RTEL1Q9NZ71 1219 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 NOP53Q9NZM5 478 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 NRBP1Q9UHY1 535 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 ZHX1Q9UKY1 873 aaPredicted RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 NOL7Q9UMY1 257 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 PCDHB6Q9Y5E3 794 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 CLIC4Q9Y696 253 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 MRVI1Q9Y6F6 885 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 MRPL42Q9Y6G3 142 aaKnown RBP5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 MYH6P13533 1939 aa5.87□□□□□ -1.47
HERPUD1-207ENST00000563781 DOCK3Q8IZD9 2030 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 MGAMO43451 1857 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 B4DLN1 442 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 RNF225M0QZC1 329 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 MSH4O15457 936 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 DHX15O43143 795 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 FIBPO43427 364 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 CCNT1O60563 726 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 KCNA2P16389 499 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 UBA1P22314 1058 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 EIF4BP23588 611 aaKnown RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 COL8A1P27658 744 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 CCND3P30281 292 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 MCM7P33993 719 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 IRS1P35568 1242 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 NASPP49321 788 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 SETQ01105 290 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 SP2Q02086 613 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 ORC2Q13416 577 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 MTMR1Q13613 665 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 FOXD4L6Q3SYB3 417 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 GNPTABQ3T906 1256 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 PRR16Q569H4 304 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 GJC2Q5T442 439 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 B3GNT9Q6UX72 402 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 FOXD4L3Q6VB84 417 aaPredicted RBP5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 ERMP1Q7Z2K6 904 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 PLA2G4DQ86XP0 818 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 CCNJLQ8IV13 435 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 CKAP2LQ8IYA6 745 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 SCFD2Q8WU76 684 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 HAS1Q92839 578 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 COPS5Q92905 334 aa5.86□□□□□ -1.47
HERPUD1-207ENST00000563781 SLC5A5Q92911 643 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms