RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 MCUR1Q96AQ8 359 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ELMO3Q96BJ8 720 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 DYDC2Q96IM9 177 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 NAP1L3Q99457 506 aaPredicted RBP13.67□□□□□ -0.22
CCDC187-201ENST00000563590 EBF2Q9HAK2 575 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 KCNQ5Q9NR82 932 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ADAM22Q9P0K1 906 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 SCOCQ9UIL1 159 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 DCTN4Q9UJW0 460 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 TCP10L2B9ZVM9 353 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 BAG2O95816 211 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
CCDC187-201ENST00000563590 CHRNA5P30532 468 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ADCY7P51828 1080 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 USP4Q13107 963 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 ZCWPW2Q504Y3 356 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 CRELD2Q6UXH1 353 aaPredicted RBP13.67□□□□□ -0.22
CCDC187-201ENST00000563590 VPS52Q8N1B4 723 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 TAB3Q8N5C8 712 aaPredicted RBP13.67□□□□□ -0.22
CCDC187-201ENST00000563590 EMILIN3Q9NT22 766 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 PCDHA12Q9UN75 941 aa13.67□□□□□ -0.22
CCDC187-201ENST00000563590 TOGARAM1Q9Y4F4 1720 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 NUP98P52948 1817 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 ASAP2O43150 1006 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 PYGLP06737 847 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 GSTA1P08263 222 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 ZCCHC18P0CG32 403 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 ALDH3A1P30838 453 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 DNAJC3Q13217 504 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 SEPT2Q15019 361 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 ECM1Q16610 540 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 TRIM59Q8IWR1 403 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 TPH2Q8IWU9 490 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 PROM2Q8N271 834 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 PPFIBP2Q8ND30 876 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 B4GALNT2Q8NHY0 566 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 RNF25Q96BH1 459 aaPredicted RBP13.66□□□□□ -0.22
CCDC187-201ENST00000563590 GANQ9H2C0 597 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 ATF5Q9Y2D1 282 aaPredicted RBP13.66□□□□□ -0.22
CCDC187-201ENST00000563590 COL16A1Q07092 1604 aaPredicted RBP13.66□□□□□ -0.22
CCDC187-201ENST00000563590 COL4A1P02462 1669 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 CASZ1Q86V15 1759 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
CCDC187-201ENST00000563590 ENTPD5O75356 428 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 UCHL3P15374 230 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 SERPINB4P48594 390 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 SBK1Q52WX2 424 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 SLC35G2Q8TBE7 412 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 DNAJC9Q8WXX5 260 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 FGD4Q96M96 766 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 CYTH2Q99418 400 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 FAM118BQ9BPY3 351 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 CORO1CQ9ULV4 474 aaPredicted RBP13.66□□□□□ -0.22
CCDC187-201ENST00000563590 PCDHA1Q9Y5I3 950 aa13.66□□□□□ -0.22
CCDC187-201ENST00000563590 CES2O00748 559 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 BAG6P46379 1132 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 GSTO1P78417 241 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 TRAF1Q13077 416 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 FITM2Q8N6M3 262 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 GBP7Q8N8V2 638 aaPredicted RBP13.65□□□□□ -0.22
CCDC187-201ENST00000563590 RMDN2Q96LZ7 410 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 PSTPIP2Q9H939 334 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 CD209Q9NNX6 404 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 SLC5A4Q9NY91 659 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 NKX1-2Q9UD57 310 aaPredicted RBP13.65□□□□□ -0.22
CCDC187-201ENST00000563590 PPP1R9AQ9ULJ8 1098 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 GCNT3O95395 438 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 ADRA2BP18089 450 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 CCDC137Q6PK04 289 aaKnown RBP13.65□□□□□ -0.22
CCDC187-201ENST00000563590 LRRC8CQ8TDW0 803 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 TLCD1Q96CP7 247 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 LRRC37BQ96QE4 947 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 MTMR9Q96QG7 549 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 ERVK-5Q9HDB9 667 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 EP400Q96L91 3159 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 PPEF1O14829 653 aaPredicted RBP13.65□□□□□ -0.22
CCDC187-201ENST00000563590 PPFIA2O75334 1257 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 AGTP01019 485 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 KYNUQ16719 465 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 C12orf60Q5U649 245 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 ARHGAP27Q6ZUM4 889 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 IRF2BP2Q7Z5L9 587 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 TTC8Q8TAM2 541 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 C1orf54Q8WWF1 131 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 DNAJC19Q96DA6 116 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 DDX50Q9BQ39 737 aaKnown RBP13.65□□□□□ -0.22
CCDC187-201ENST00000563590 NT5C3AQ9H0P0 336 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.65□□□□□ -0.22
CCDC187-201ENST00000563590 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 SLC12A4Q9UP95 1085 aa13.65□□□□□ -0.22
CCDC187-201ENST00000563590 MYH7BA7E2Y1 1941 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 MYH1P12882 1939 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 POTEB3A0JP26 581 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 POTECB2RU33 542 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms