RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 YEATS4O95619 227 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 CTNNB1P35222 781 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 STAT6P42226 847 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 EFNA5P52803 228 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 SLC12A3P55017 1021 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 ERVK-21P61565 698 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 RNASELQ05823 741 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 MBTD1Q05BQ5 628 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 DMP1Q13316 513 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 PRPF4BQ13523 1007 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 PCBP1Q15365 356 aaKnown RBP eCLIP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 TMEM119Q4V9L6 283 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 EPC2Q52LR7 807 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 NOTUMQ6P988 496 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 SPRED2Q7Z698 418 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 CDR2LQ86X02 465 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 CMTR2Q8IYT2 770 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 MYCT1Q8N699 235 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 KCNG4Q8TDN1 519 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 BSNDQ8WZ55 320 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 LARP4BQ92615 738 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 LPPQ93052 612 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 ZNF689Q96CS4 500 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 SPATA32Q96LK8 384 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 SAMD11Q96NU1 681 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 TIPINQ9BVW5 301 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 APOL6Q9BWW8 343 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 COL25A1Q9BXS0 654 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 AAASQ9NRG9 546 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 AGPAT5Q9NUQ2 364 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 FAM105AQ9NUU6 356 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 TYW1Q9NV66 732 aaKnown RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 PRMT7Q9NVM4 692 aaPredicted RBP9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 PCDHB2Q9Y5E7 798 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 PCDHB12Q9Y5F1 795 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 ARID2Q68CP9 1835 aa9.96□□□□□ -0.82
SNRPA1-214ENST00000560987 TTC3P53804 2025 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 SLC16A4O15374 487 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 B4GALT5O43286 388 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 TSPAN1O60635 241 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 BRD1O95696 1058 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 PRKCBP05771 671 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 ITGA4P13612 1032 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 GUCY2CP25092 1073 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 HOXA11P31270 313 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 BMPR1AP36894 532 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 ANP32AP39687 249 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 NPTX2P47972 431 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 RAB27AP51159 221 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 KRT85P78386 507 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 NUCB2P80303 420 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 STRN3Q13033 797 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 GPM6BQ13491 265 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 ARSHQ5FYA8 562 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 GLB1LQ6UWU2 654 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 CCDC73Q6ZRK6 1079 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 DYMQ7RTS9 669 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 IFNLR1Q8IU57 520 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 HACE1Q8IYU2 909 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 HELQQ8TDG4 1101 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 FAM193BQ96PV7 902 aaPredicted RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 ADPGKQ9BRR6 497 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 TCHPQ9BT92 498 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 KIFC3Q9BVG8 833 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 NFKBIZQ9BYH8 718 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 TMEM117Q9H0C3 514 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 C17orf75Q9HAS0 396 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 FAM13BQ9NYF5 915 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 KCND2Q9NZV8 630 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 LARSQ9P2J5 1176 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 PARP2Q9UGN5 583 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 USP20Q9Y2K6 914 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 ZDHHC9Q9Y397 364 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 RWDD3Q9Y3V2 267 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 RBM19Q9Y4C8 960 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 MRPL42Q9Y6G3 142 aaKnown RBP9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 ADGRA3Q8IWK6 1321 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 PTPRSQ13332 1948 aa9.95□□□□□ -0.82
SNRPA1-214ENST00000560987 LAMA2P24043 3122 aaKnown RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 EPOPA6NHQ4 379 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 ACKR2O00590 384 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 TBCAO75347 108 aaKnown RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 CSPG5O95196 566 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 NPTXRO95502 500 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 RB1P06400 928 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 PLS3P13797 630 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 ARF4P18085 180 aaPredicted RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 MATR3P43243 847 aaKnown RBP eCLIP9.94□□□□□ -0.821e-7■■□□□ 11.4
SNRPA1-214ENST00000560987 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 PTPROQ16827 1216 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 TJAP1Q5JTD0 557 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 APBB1IPQ7Z5R6 666 aaPredicted RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 CRIPAKQ8N1N5 446 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 URGCPQ8TCY9 931 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 GDPD5Q8WTR4 605 aa9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 ATXN2LQ8WWM7 1075 aaKnown RBP9.94□□□□□ -0.82
SNRPA1-214ENST00000560987 DHX58Q96C10 678 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms