RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 GNA14O95837 355 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 PIGRP01833 764 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 PLCB2Q00722 1185 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 PTK7Q13308 1070 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 ADAM9Q13443 819 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 HSP90AA2PQ14568 343 aaPredicted RBP18.48■□□□□ 0.55
SNX1-203ENST00000558040 RPAINQ86UA6 219 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 C12orf56Q8IXR9 622 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 ZC3H3Q8IXZ2 948 aaKnown RBP18.48■□□□□ 0.55
SNX1-203ENST00000558040 ANKLE1Q8NAG6 615 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 PPP1R16BQ96T49 567 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 HSD3B7Q9H2F3 369 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 ADAMTS10Q9H324 1103 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 IFT122Q9HBG6 1241 aa18.48■□□□□ 0.55
SNX1-203ENST00000558040 ACKR2O00590 384 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 GPR32O75388 356 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 EEF1GP26641 437 aaKnown RBP18.47■□□□□ 0.55
SNX1-203ENST00000558040 GJA8P48165 433 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 MBTD1Q05BQ5 628 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 PCBP1Q15365 356 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX1-203ENST00000558040 FAM187BQ17R55 369 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 KIZQ2M2Z5 673 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 SLFN12LQ6IEE8 588 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 ARMCX5Q6P1M9 558 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 ZPBP2Q6X784 338 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 LRRC55Q6ZSA7 311 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 FILIP1Q7Z7B0 1213 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 SLC9A9Q8IVB4 645 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 TMEM174Q8WUU8 243 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 ZNF668Q96K58 619 aaPredicted RBP18.47■□□□□ 0.55
SNX1-203ENST00000558040 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 TMEM106CQ9BVX2 250 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 FZD8Q9H461 694 aa18.47■□□□□ 0.55
SNX1-203ENST00000558040 KCNJ18B7U540 433 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 KIAA0391O15091 583 aaKnown RBP18.46■□□□□ 0.55
SNX1-203ENST00000558040 CLIC2O15247 247 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 SLC16A3O15427 465 aaKnown RBP18.46■□□□□ 0.55
SNX1-203ENST00000558040 CAND2O75155 1236 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 ERLIN2O94905 339 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 SERPINC1P01008 464 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 GARTP22102 1010 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 CRYBB1P53674 252 aaPredicted RBP18.46■□□□□ 0.55
SNX1-203ENST00000558040 MRPS6P82932 125 aaKnown RBP18.46■□□□□ 0.55
SNX1-203ENST00000558040 TMEM62Q0P6H9 643 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 PRPF4BQ13523 1007 aaKnown RBP18.46■□□□□ 0.55
SNX1-203ENST00000558040 KCNJ12Q14500 433 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 TMEM132AQ24JP5 1023 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 HSP90AA4PQ58FG1 418 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 SARM1Q6SZW1 724 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 CTAGE1Q96RT6 745 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 GINS2Q9Y248 185 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 FRMD4BQ9Y2L6 1034 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 TRPV2Q9Y5S1 764 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 MROH7Q68CQ1 1323 aa18.46■□□□□ 0.55
SNX1-203ENST00000558040 TRIP12Q14669 1992 aaPredicted RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 TPM2P07951 284 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 EPB41P11171 864 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 ATP1A3P13637 1013 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 DARSP14868 501 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 SFPQP23246 707 aaKnown RBP eCLIP18.45■□□□□ 0.54
SNX1-203ENST00000558040 CYP2J2P51589 502 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 NCBP1Q09161 790 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 CCDC40Q4G0X9 1142 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 TCP11X2Q5H9J9 407 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 CREBRFQ8IUR6 639 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 POMGNT1Q8WZA1 660 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 CNOT6LQ96LI5 555 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 OSMRQ99650 979 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 MKNK1Q9BUB5 465 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 TARS2Q9BW92 718 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 CELF4Q9BZC1 486 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 SENP6Q9GZR1 1112 aaPredicted RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 MCOLN1Q9GZU1 580 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 IKZF4Q9H2S9 585 aa18.45■□□□□ 0.54
SNX1-203ENST00000558040 TRMT13Q9NUP7 481 aaKnown RBP18.45■□□□□ 0.54
SNX1-203ENST00000558040 ANKRD63C9JTQ0 380 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 CBFA2T2O43439 604 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 EXOC3O60645 756 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 TOM1L1O75674 476 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 TPM3P06753 285 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 EIF4BP23588 611 aaKnown RBP18.44■□□□□ 0.54
SNX1-203ENST00000558040 THPOP40225 353 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 MATR3P43243 847 aaKnown RBP eCLIP18.44■□□□□ 0.54
SNX1-203ENST00000558040 CDK7P50613 346 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 FANCCQ00597 558 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 CEP135Q66GS9 1140 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 SLC39A4Q6P5W5 647 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 IRF2BP1Q8IU81 584 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 CCDC155Q8N6L0 562 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 XXYLT1Q8NBI6 393 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 EEF2KMTQ96G04 330 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 TRIM5Q9C035 493 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 MINDY3Q9H8M7 445 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 METTL14Q9HCE5 456 aaKnown RBP18.44■□□□□ 0.54
SNX1-203ENST00000558040 DMAC2Q9NW81 257 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 HSPBP1Q9NZL4 362 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 LIMA1Q9UHB6 759 aaKnown RBP18.44■□□□□ 0.54
SNX1-203ENST00000558040 STYXL1Q9Y6J8 313 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 CNTNAP2Q9UHC6 1331 aa18.44■□□□□ 0.54
SNX1-203ENST00000558040 CEP350Q5VT06 3117 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms