RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 NCKAP1LP55160 1127 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 FAM189BP81408 668 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 SMAD3P84022 425 aaKnown RBP28.14■■■□□ 2.1
SMAD6-202ENST00000557916 PRPF4BQ13523 1007 aaKnown RBP28.14■■■□□ 2.1
SMAD6-202ENST00000557916 GRAMD1CQ8IYS0 662 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 PAGE5Q96GU1 130 aa28.14■■■□□ 2.1
SMAD6-202ENST00000557916 PHLPP2Q6ZVD8 1323 aa28.14■■■□□ 2.09
SMAD6-202ENST00000557916 MYH11P35749 1972 aa28.14■■■□□ 2.09
SMAD6-202ENST00000557916 H0YCG3 227 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 GADD45BO75293 160 aaPredicted RBP28.13■■■□□ 2.09
SMAD6-202ENST00000557916 RABGGTBP53611 331 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 ASIC1P78348 528 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 CNNM4Q6P4Q7 775 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 NOTUMQ6P988 496 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 CLEC17AQ6ZS10 378 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 HAUS6Q7Z4H7 955 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 SFR1Q86XK3 245 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 FAM178BQ8IXR5 827 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 BLZF1Q9H2G9 400 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 PANK4Q9NVE7 773 aa28.13■■■□□ 2.09
SMAD6-202ENST00000557916 LAMA3Q16787 3333 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 FRMD3A2A2Y4 597 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 STAG3L1P0CL83 205 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 TMEM132AQ24JP5 1023 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 HERC4Q5GLZ8 1057 aaPredicted RBP28.12■■■□□ 2.09
SMAD6-202ENST00000557916 KRBA2Q6ZNG9 492 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 NPAS4Q8IUM7 802 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 CCDC65Q8IXS2 484 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 CNNM3Q8NE01 707 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 TRAIPQ9BWF2 469 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 PBX4Q9BYU1 374 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 RNF216Q9NWF9 866 aaPredicted RBP28.12■■■□□ 2.09
SMAD6-202ENST00000557916 SEL1LQ9UBV2 794 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 LRFN2Q9ULH4 789 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 USP20Q9Y2K6 914 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 PCDHB7Q9Y5E2 793 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 CNTNAP2Q9UHC6 1331 aa28.12■■■□□ 2.09
SMAD6-202ENST00000557916 A0A0U1RQF3 1178 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 K7ENM7 598 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 SOX1O00570 391 aaPredicted RBP28.11■■■□□ 2.09
SMAD6-202ENST00000557916 TLL1O43897 1013 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 EDN1P05305 212 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 MAPTP10636 758 aaKnown RBP28.11■■■□□ 2.09
SMAD6-202ENST00000557916 CASP1P29466 404 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 FAM160A1Q05DH4 1040 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 TAS1R3Q7RTX0 852 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 FMR1NBQ8N0W7 255 aaPredicted RBP28.11■■■□□ 2.09
SMAD6-202ENST00000557916 CRIPAKQ8N1N5 446 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 CCDC51Q96ER9 411 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 FIZ1Q96SL8 496 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 PCDHA11Q9Y5I1 949 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 PTPRSQ13332 1948 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 TTC3P53804 2025 aa28.11■■■□□ 2.09
SMAD6-202ENST00000557916 A0A1B0GUA9 196 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 TTLL13PA6NNM8 815 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 PBX2P40425 430 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 RAB27AP51159 221 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 STRN3Q13033 797 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 CUL4BQ13620 913 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 ECHDC2Q86YB7 292 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 SLC17A8Q8NDX2 589 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 ENGASEQ8NFI3 743 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 RAD9AQ99638 391 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 ELAC1Q9H777 363 aaKnown RBP28.1■■■□□ 2.09
SMAD6-202ENST00000557916 FAM105AQ9NUU6 356 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 TMEM161AQ9NX61 479 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 MSRAQ9UJ68 235 aa28.1■■■□□ 2.09
SMAD6-202ENST00000557916 PRPF40AO75400 957 aaKnown RBP28.09■■■□□ 2.09
SMAD6-202ENST00000557916 SKIP12755 728 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 SCP2P22307 547 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 NMT1P30419 496 aaKnown RBP28.09■■■□□ 2.09
SMAD6-202ENST00000557916 SNW1Q13573 536 aaKnown RBP28.09■■■□□ 2.09
SMAD6-202ENST00000557916 RAB30Q15771 203 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 UBXN11Q5T124 520 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 NT5DC1Q5TFE4 455 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 CDR2LQ86X02 465 aaPredicted RBP28.09■■■□□ 2.09
SMAD6-202ENST00000557916 MRPL44Q9H9J2 332 aaKnown RBP28.09■■■□□ 2.09
SMAD6-202ENST00000557916 TBC1D7Q9P0N9 293 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 MYOGP15173 224 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 SLC27A1Q6PCB7 646 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 ZNF720Q7Z2F6 126 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 RNF169Q8NCN4 708 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 KCNN1Q92952 543 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 GBP4Q96PP9 640 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 MRPL4Q9BYD3 311 aaKnown RBP28.09■■■□□ 2.09
SMAD6-202ENST00000557916 OLFML3Q9NRN5 406 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 INSL6Q9Y581 213 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 PCDHB2Q9Y5E7 798 aa28.09■■■□□ 2.09
SMAD6-202ENST00000557916 N4BP3O15049 544 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 EOMESO95936 686 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 UBE2HP62256 183 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 HTRA4P83105 476 aaPredicted RBP28.08■■■□□ 2.09
SMAD6-202ENST00000557916 COASYQ13057 564 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 ATF7IP2Q5U623 682 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 UNC13DQ70J99 1090 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 CCDC34Q96HJ3 373 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 YME1L1Q96TA2 773 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 EIF2AQ9BY44 585 aaKnown RBP28.08■■■□□ 2.09
SMAD6-202ENST00000557916 ST6GALNAC4Q9H4F1 302 aa28.08■■■□□ 2.09
SMAD6-202ENST00000557916 PDZD7Q9H5P4 517 aa28.08■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms