RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 TDP2O95551 362 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 POMCP01189 267 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 MYBP10242 640 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 RFX1P22670 979 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 GBP2P32456 591 aaPredicted RBP13.79□□□□□ -0.2
SNX6-209ENST00000557265 AK2P54819 239 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 NLRP5P59047 1200 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 NTRK3Q16288 839 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 PLA2G4FQ68DD2 849 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 ANO5Q75V66 913 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 TAS1R1Q7RTX1 841 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 CMASQ8NFW8 434 aaPredicted RBP13.79□□□□□ -0.2
SNX6-209ENST00000557265 RNF26Q9BY78 433 aaPredicted RBP13.79□□□□□ -0.2
SNX6-209ENST00000557265 WDR6Q9NNW5 1121 aaKnown RBP13.79□□□□□ -0.2
SNX6-209ENST00000557265 PRG3Q9Y2Y8 225 aaPredicted RBP13.79□□□□□ -0.2
SNX6-209ENST00000557265 WDR87Q6ZQQ6 2873 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 CACNA1AO00555 2505 aa13.79□□□□□ -0.2
SNX6-209ENST00000557265 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 TEX28O15482 410 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 SOD2P04179 222 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 URODP06132 367 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 ADH1AP07327 375 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 CYP3A7P24462 503 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 HOXA11P31270 313 aaPredicted RBP13.78□□□□□ -0.2
SNX6-209ENST00000557265 NPEPPSP55786 919 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 PSMC5P62195 406 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 NONOQ15233 471 aaKnown RBP eCLIP13.78□□□□□ -0.2
SNX6-209ENST00000557265 BMP2KLQ5H9B9 411 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 UBXN11Q5T124 520 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 SLC44A3Q8N4M1 653 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 STAMQ92783 540 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 JAKMIP1Q96N16 626 aaKnown RBP13.78□□□□□ -0.2
SNX6-209ENST00000557265 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 JPH2Q9BR39 696 aaPredicted RBP13.78□□□□□ -0.2
SNX6-209ENST00000557265 MINDY3Q9H8M7 445 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 SH3GLB2Q9NR46 395 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 CA14Q9ULX7 337 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 COL4A3BPQ9Y5P4 624 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 R4GN57 208 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 VPS13AQ96RL7 3174 aa13.78□□□□□ -0.2
SNX6-209ENST00000557265 INPPL1O15357 1258 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 ZNF292O60281 2723 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 CLUHO75153 1309 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 RFPL2O75678 378 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 GLUD1P00367 558 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 LMNAP02545 664 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 SPATA31D3P0C874 917 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 IFNAR1P17181 557 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 MYH9P35579 1960 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 OR1G1P47890 313 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 CCT2P78371 535 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 NID2Q14112 1375 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 ELMSAN1Q6PJG2 1045 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 CYP26C1Q6V0L0 522 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 SPATA31D4Q6ZUB0 917 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 SRGAP1Q7Z6B7 1085 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 SKAP1Q86WV1 359 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 PRPF31Q8WWY3 499 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 SLC7A3Q8WY07 619 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 SMG7Q92540 1137 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 TMEM143Q96AN5 459 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 MYADMQ96S97 322 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 HERC2P3Q9BVR0 1158 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 C22orf23Q9BZE7 217 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 SEMA4AQ9H3S1 761 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 TBC1D17Q9HA65 648 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
SNX6-209ENST00000557265 MARCH5Q9NX47 278 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 EPS15L1Q9UBC2 864 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 CNTNAP2Q9UHC6 1331 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 DPP7Q9UHL4 492 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
SNX6-209ENST00000557265 EML1O00423 815 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
SNX6-209ENST00000557265 QARSP47897 775 aaKnown RBP13.76□□□□□ -0.21
SNX6-209ENST00000557265 GLUD2P49448 558 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 LAMTOR4Q0VGL1 99 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 SPECC1Q5M775 1068 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 KIAA0319Q5VV43 1072 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 BLOC1S2Q6QNY1 142 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 COLGALT2Q8IYK4 626 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 FBXL16Q8N461 479 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 SMG8Q8ND04 991 aaKnown RBP13.76□□□□□ -0.21
SNX6-209ENST00000557265 PSPC1Q8WXF1 523 aaKnown RBP13.76□□□□□ -0.21
SNX6-209ENST00000557265 KCNB2Q92953 911 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 CEP170P1Q96L14 293 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 RHOBTB2Q9BYZ6 727 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 RXFP1Q9HBX9 757 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 UBN1Q9NPG3 1134 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 PCDHA4Q9UN74 947 aa13.76□□□□□ -0.21
SNX6-209ENST00000557265 F8W810 466 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 DCNP07585 359 aaKnown RBP13.75□□□□□ -0.21
SNX6-209ENST00000557265 SRFP11831 508 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 ITGA4P13612 1032 aa13.75□□□□□ -0.21
SNX6-209ENST00000557265 PDIA3P30101 505 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms