RNA–Protein interactions for RNA: ENST00000554556.5

GABRB3-206, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-206ENST00000554556 CNNM3Q8NE01 707 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 SLC22A17Q8WUG5 538 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 WASF1Q92558 559 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 EMILIN2Q9BXX0 1053 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 RSAD1Q9HA92 442 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 DNAJB4Q9UDY4 337 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 CDH22Q9UJ99 828 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 DBR1Q9UK59 544 aaKnown RBP24.86■■□□□ 1.57
GABRB3-206ENST00000554556 FAN1Q9Y2M0 1017 aa24.86■■□□□ 1.57
GABRB3-206ENST00000554556 TRIOO75962 3097 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 EPCAMP16422 314 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 YWHABP31946 246 aaKnown RBP24.85■■□□□ 1.57
GABRB3-206ENST00000554556 XKR9Q5GH70 373 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 NCAPH2Q6IBW4 605 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 C12orf76Q8N812 135 aaPredicted RBP24.85■■□□□ 1.57
GABRB3-206ENST00000554556 ZNF579Q8NAF0 562 aaKnown RBP24.85■■□□□ 1.57
GABRB3-206ENST00000554556 TDRD5Q8NAT2 981 aaKnown RBP24.85■■□□□ 1.57
GABRB3-206ENST00000554556 HAS1Q92839 578 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 LXNQ9BS40 222 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 TMEM175Q9BSA9 504 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 ZSWIM4Q9H7M6 989 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 UBN1Q9NPG3 1134 aa24.85■■□□□ 1.57
GABRB3-206ENST00000554556 SPDYE4A6NLX3 237 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 NUBP1P53384 320 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 VCPP55072 806 aaKnown RBP24.84■■□□□ 1.57
GABRB3-206ENST00000554556 NCBP1Q09161 790 aaKnown RBP24.84■■□□□ 1.57
GABRB3-206ENST00000554556 PCBP1Q15365 356 aaKnown RBP eCLIP24.84■■□□□ 1.57
GABRB3-206ENST00000554556 FERMT3Q86UX7 667 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 ZNF280BQ86YH2 543 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 ZDHHC14Q8IZN3 488 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 RNF149Q8NC42 400 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 BCL7CQ8WUZ0 217 aaPredicted RBP24.84■■□□□ 1.57
GABRB3-206ENST00000554556 WRAP73Q9P2S5 460 aaPredicted RBP24.84■■□□□ 1.57
GABRB3-206ENST00000554556 USTQ9Y2C2 406 aa24.84■■□□□ 1.57
GABRB3-206ENST00000554556 PFKFB2O60825 505 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 ERLIN2O94905 339 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 WEE2P0C1S8 567 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 NCLP19338 710 aaKnown RBP24.83■■□□□ 1.57
GABRB3-206ENST00000554556 KLRC2P26717 231 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 AXLP30530 894 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 TCF15Q12870 199 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 EMC2Q15006 297 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 PTPN14Q15678 1187 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 DYDC2Q96IM9 177 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 MTRQ99707 1265 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 MINDY3Q9H8M7 445 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 SFXN1Q9H9B4 322 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 RGL1Q9NZL6 768 aa24.83■■□□□ 1.57
GABRB3-206ENST00000554556 ORC3Q9UBD5 711 aaPredicted RBP24.83■■□□□ 1.57
GABRB3-206ENST00000554556 ZDBF2Q9HCK1 2354 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 DDHD2O94830 711 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 HOXA11P31270 313 aaPredicted RBP24.82■■□□□ 1.56
GABRB3-206ENST00000554556 MXD4Q14582 209 aaPredicted RBP24.82■■□□□ 1.56
GABRB3-206ENST00000554556 ANKRD1Q15327 319 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 OXER1Q8TDS5 423 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 KLHL5Q96PQ7 755 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 BRMS1Q9HCU9 246 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 MRPL17Q9NRX2 175 aaKnown RBP24.82■■□□□ 1.56
GABRB3-206ENST00000554556 BMP2KQ9NSY1 1161 aaPredicted RBP24.82■■□□□ 1.56
GABRB3-206ENST00000554556 SSX2IPQ9Y2D8 614 aa24.82■■□□□ 1.56
GABRB3-206ENST00000554556 ITGA4P13612 1032 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 TFDP1Q14186 410 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 CTTNQ14247 550 aaKnown RBP24.81■■□□□ 1.56
GABRB3-206ENST00000554556 UBXN11Q5T124 520 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 KANK3Q6NY19 840 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 TMC5Q6UXY8 1006 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 POTEDQ86YR6 584 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 TPH2Q8IWU9 490 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 ACSF2Q96CM8 615 aaPredicted RBP24.81■■□□□ 1.56
GABRB3-206ENST00000554556 PHOX2BQ99453 314 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 GJB4Q9NTQ9 266 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 LIMD1Q9UGP4 676 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 TPCN1Q9ULQ1 816 aa24.81■■□□□ 1.56
GABRB3-206ENST00000554556 ARID2Q68CP9 1835 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 NRP1O14786 923 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 BRD1O95696 1058 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 POMCP01189 267 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 SSBP05455 408 aaKnown RBP eCLIP24.8■■□□□ 1.56
GABRB3-206ENST00000554556 KRT2P35908 639 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 CYP4A11Q02928 519 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 CCDC51Q96ER9 411 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 VN1R3Q9BXE9 311 aa24.8■■□□□ 1.56
GABRB3-206ENST00000554556 B4GALT3O60512 393 aa24.79■■□□□ 1.56
GABRB3-206ENST00000554556 PTENP60484 403 aa24.79■■□□□ 1.56
GABRB3-206ENST00000554556 POU5F1BQ06416 359 aa24.79■■□□□ 1.56
GABRB3-206ENST00000554556 NOTUMQ6P988 496 aa24.79■■□□□ 1.56
GABRB3-206ENST00000554556 GPR149Q86SP6 731 aa24.79■■□□□ 1.56
GABRB3-206ENST00000554556 PCDHA12Q9UN75 941 aa24.79■■□□□ 1.56
GABRB3-206ENST00000554556 SLITRK3O94933 977 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 PDGFBP01127 241 aaPredicted RBP24.78■■□□□ 1.56
GABRB3-206ENST00000554556 URODP06132 367 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 CNPP09543 421 aaKnown RBP24.78■■□□□ 1.56
GABRB3-206ENST00000554556 CLCN4P51793 760 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 AFF1P51825 1210 aaKnown RBP24.78■■□□□ 1.56
GABRB3-206ENST00000554556 SPIRE1Q08AE8 756 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 ELMSAN1Q6PJG2 1045 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 CCDC149Q6ZUS6 474 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 OTOP3Q7RTS5 596 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 HACE1Q8IYU2 909 aa24.78■■□□□ 1.56
GABRB3-206ENST00000554556 ATOH1Q92858 354 aaPredicted RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms