RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 P2RX5Q93086 422 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 PGBD4Q96DM1 585 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 PLIN2Q99541 437 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 FZD8Q9H461 694 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 PCDHB2Q9Y5E7 798 aa17.04■□□□□ 0.32
PRPF40B-211ENST00000551063 VCANP13611 3396 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 CNTNAP2Q9UHC6 1331 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 HIP1RO75146 1068 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 PPP6R2O75170 966 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 ARF4P18085 180 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 EFNA5P52803 228 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 MAPK7Q13164 816 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 DMP1Q13316 513 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 KARSQ15046 597 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 PTPROQ16827 1216 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 ATL3Q6DD88 541 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 MRPL10Q7Z7H8 261 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 ADAMTS19Q8TE59 1207 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 RAD54LQ92698 747 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 CASD1Q96PB1 797 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 CCDC113Q9H0I3 377 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 LMAN2LQ9H0V9 348 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 AAASQ9NRG9 546 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 CCDC39Q9UFE4 941 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 KCNG1Q9UIX4 513 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 TTC28Q96AY4 2481 aa17.03■□□□□ 0.32
PRPF40B-211ENST00000551063 A0A1B0GUA9 196 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 LAG3P18627 525 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 PKP1Q13835 747 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 CSPP1Q1MSJ5 1256 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 FOXD4L5Q5VV16 416 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 GLB1LQ6UWU2 654 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 LRRC15Q8TF66 581 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 FOXD4L4Q8WXT5 416 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 EPSTI1Q96J88 318 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 CLIC6Q96NY7 704 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 UHRF1Q96T88 793 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 BLOC1S4Q9NUP1 217 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 TYW1Q9NV66 732 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 STK17AQ9UEE5 414 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 COG5Q9UP83 839 aa17.02■□□□□ 0.32
PRPF40B-211ENST00000551063 ACKR2O00590 384 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 SPTLC2O15270 562 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 B4GALT5O43286 388 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 BRD1O95696 1058 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 PRKCBP05771 671 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 NPTX2P47972 431 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 PEX3P56589 373 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 TIGD5Q53EQ6 642 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 SPOUT1Q5T280 376 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 SLC27A1Q6PCB7 646 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 USP49Q70CQ1 688 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 HACE1Q8IYU2 909 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 HELQQ8TDG4 1101 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 SPIRE2Q8WWL2 714 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 LARP4BQ92615 738 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 LPPQ93052 612 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 MRPL38Q96DV4 380 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 CPB2Q96IY4 423 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 KIFC3Q9BVG8 833 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 CWH43Q9H720 699 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 UBN1Q9NPG3 1134 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 ARHGAP28Q9P2N2 729 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 ODF2LQ9ULJ1 636 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 IPPQ9Y573 584 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 PCDHB12Q9Y5F1 795 aa17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 COL4A4P53420 1690 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-211ENST00000551063 PRRC2BQ5JSZ5 2229 aaKnown RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 CARNS1A5YM72 827 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 N4BP3O15049 544 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 PLS3P13797 630 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 PRPF4BQ13523 1007 aaKnown RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 RALGAPA2Q2PPJ7 1873 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 SPECC1Q5M775 1068 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 GPBP1Q86WP2 473 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 SMG8Q8ND04 991 aaKnown RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 KCNG4Q8TDN1 519 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 EIF2AQ9BY44 585 aaKnown RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 RSAD1Q9HA92 442 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 POLD4Q9HCU8 107 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 KMT5AQ9NQR1 393 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 TFIP11Q9UBB9 837 aaKnown RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 RBM19Q9Y4C8 960 aaKnown RBP17■□□□□ 0.31
PRPF40B-211ENST00000551063 ZMYM2Q9UBW7 1377 aa17■□□□□ 0.31
PRPF40B-211ENST00000551063 CCDC169A6NNP5 214 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 MEIS3P2A8K0S8 358 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 OFD1O75665 1012 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 BMP1P13497 986 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 DDIT3P35638 169 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 PPM1AP35813 382 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 UBE3AQ05086 875 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 MCM6Q14566 821 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 ARSHQ5FYA8 562 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 NOMO2Q5JPE7 1267 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 AGMOQ6ZNB7 445 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 CCDC73Q6ZRK6 1079 aa16.99■□□□□ 0.31
PRPF40B-211ENST00000551063 LRRC55Q6ZSA7 311 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms