RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SNTG2Q9NY99 539 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 WASF3Q9UPY6 502 aa6.28□□□□□ -1.4
SCAF11-214ENST00000550893 ABCC4O15439 1325 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 FAM47E-STBD1D6RA91 191 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 NKRFO15226 690 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 PRICKLE3O43900 615 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 LTFP02788 710 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 IGKV5-2P06315 115 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 C6orf222P0C671 652 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 GNAT1P11488 350 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 EIF2S2P20042 333 aaKnown RBP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 SUMO1P63165 101 aaKnown RBP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 GRIN1Q05586 938 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 SPIRE1Q08AE8 756 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 LMOD3Q0VAK6 560 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 WDR43Q15061 677 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 SLC10A5Q5PT55 438 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 NBPF5PQ86XG9 351 aaPredicted RBP6.27□□□□□ -1.41
SCAF11-214ENST00000550893 TRIM48Q8IWZ4 208 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 CXorf38Q8TB03 319 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 RNF181Q9P0P0 153 aa6.27□□□□□ -1.41
SCAF11-214ENST00000550893 IL16Q14005 1332 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 DDX3XO00571 662 aaKnown RBP eCLIP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 SYN1P17600 705 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 GJA9P57773 515 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 TUSC3Q13454 348 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 TCIRG1Q13488 830 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 SF3A1Q15459 793 aaKnown RBP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 HABP4Q5JVS0 413 aaKnown RBP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 MAMDC2Q7Z304 686 aaPredicted RBP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 UHMK1Q8TAS1 419 aaKnown RBP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 PTPRN2Q92932 1015 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 MASTLQ96GX5 879 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 ZSWIM3Q96MP5 696 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 IPO9Q96P70 1041 aaKnown RBP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 SRPK1Q96SB4 655 aaKnown RBP6.26□□□□□ -1.41
SCAF11-214ENST00000550893 DNAJC7Q99615 494 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 ALG1Q9BT22 464 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 DHRS4Q9BTZ2 278 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 RBPJLQ9UBG7 517 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 TELO2Q9Y4R8 837 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 DUSP10Q9Y6W6 482 aa6.26□□□□□ -1.41
SCAF11-214ENST00000550893 H0YIN7 160 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 ELL2O00472 640 aaPredicted RBP6.25□□□□□ -1.41
SCAF11-214ENST00000550893 AQP7O14520 342 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 TCERG1O14776 1098 aaKnown RBP6.25□□□□□ -1.41
SCAF11-214ENST00000550893 NPR1P16066 1061 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 RTP5Q14D33 572 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 LONRF2Q1L5Z9 754 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 ZFYVE27Q5T4F4 411 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 MCTP2Q6DN12 878 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 TMC5Q6UXY8 1006 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 MTDHQ86UE4 582 aaKnown RBP6.25□□□□□ -1.41
SCAF11-214ENST00000550893 FERMT3Q86UX7 667 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 PROSER1Q86XN7 944 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 TTLL11Q8NHH1 800 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 PLBD2Q8NHP8 589 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 DDX1Q92499 740 aaKnown RBP6.25□□□□□ -1.41
SCAF11-214ENST00000550893 LNPKQ9C0E8 428 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 HSPBP1Q9NZL4 362 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 DSEQ9UL01 958 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 MRPS23Q9Y3D9 190 aaKnown RBP6.25□□□□□ -1.41
SCAF11-214ENST00000550893 PCDHA8Q9Y5H6 950 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 OTOFQ9HC10 1997 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 MYH13Q9UKX3 1938 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 ZNF609O15014 1411 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 RNF123Q5XPI4 1314 aa6.25□□□□□ -1.41
SCAF11-214ENST00000550893 RTL9Q8NET4 1388 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 BUD31P41223 144 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 GNAI1P63096 354 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 ST5P78524 1137 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 AIMP1Q12904 312 aaKnown RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 PAK1Q13153 545 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 UBXN11Q5T124 520 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 SOGA3Q5TF21 947 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 KIF6Q6ZMV9 814 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 TRMT2AQ8IZ69 625 aaKnown RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 DNAJC5GQ8N7S2 189 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 TXNDC5Q8NBS9 432 aaKnown RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 CELF1Q92879 486 aaKnown RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 KISS1RQ969F8 398 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 ZNF622Q969S3 477 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 MKL1Q969V6 931 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 CLIC6Q96NY7 704 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 CRAMP1Q96RY5 1269 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 TMEM209Q96SK2 561 aa6.24□□□□□ -1.41
SCAF11-214ENST00000550893 PNNQ9H307 717 aaKnown RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 ZNF277Q9NRM2 450 aaPredicted RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 LAS1LQ9Y4W2 734 aaKnown RBP6.24□□□□□ -1.41
SCAF11-214ENST00000550893 TCRBV5S4A2TA0A5A2 114 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 SHTN1A0MZ66 631 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 GLTPD2A6NH11 291 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 YDJCA8MPS7 323 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 FZD9O00144 591 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 FAHP16930 419 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 ZNF28P17035 718 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 CNR2P34972 360 aa6.23□□□□□ -1.41
SCAF11-214ENST00000550893 MLLT6P55198 1093 aaPredicted RBP6.23□□□□□ -1.41
SCAF11-214ENST00000550893 GABREP78334 506 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms