RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 INHAP05111 366 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 PRKCBP05771 671 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 TPM1P09493 284 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 CYP2C9P11712 490 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 KRT13P13646 458 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 GARTP22102 1010 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 GRK4P32298 578 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPRR-209ENST00000549308 PHKA2P46019 1235 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 TBX2Q13207 712 aaPredicted RBP13.2□□□□□ -0.3
PTPRR-209ENST00000549308 SYCP1Q15431 976 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 MAPK6Q16659 721 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 SLC39A4Q6P5W5 647 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 RDH13Q8NBN7 331 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 TMEM174Q8WUU8 243 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 PPP1R16BQ96T49 567 aa13.2□□□□□ -0.3
PTPRR-209ENST00000549308 DDX20Q9UHI6 824 aaKnown RBP13.2□□□□□ -0.3
PTPRR-209ENST00000549308 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
PTPRR-209ENST00000549308 GOLGA8IPA6NC78 632 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 GOLGA8JA6NMD2 632 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 PIGRP01833 764 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 AFPP02771 609 aaKnown RBP13.19□□□□□ -0.3
PTPRR-209ENST00000549308 SFPQP23246 707 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPRR-209ENST00000549308 PTENP60484 403 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 NKX3-2P78367 333 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 KCNH2Q12809 1159 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 TRIM14Q14142 442 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 CXCL17Q6UXB2 119 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 CPLX3Q8WVH0 158 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 SAAL1Q96ER3 474 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 SCLT1Q96NL6 688 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 ERGIC2Q96RQ1 377 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 TARS2Q9BW92 718 aaKnown RBP13.19□□□□□ -0.3
PTPRR-209ENST00000549308 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
PTPRR-209ENST00000549308 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
PTPRR-209ENST00000549308 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 PTCH2Q9Y6C5 1203 aa13.19□□□□□ -0.3
PTPRR-209ENST00000549308 A0A087WZ62 844 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 AKR1B15C9JRZ8 316 aaPredicted RBP13.18□□□□□ -0.3
PTPRR-209ENST00000549308 INO80B-WBP1J3KQ70 363 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
PTPRR-209ENST00000549308 GNAT1P11488 350 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 ADSSP30520 456 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 POU5F1BQ06416 359 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 GOLGA8FQ08AF8 430 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 GOLGA8DPQ0D2H9 430 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 LRRC8AQ8IWT6 810 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 KIAA0319LQ8IZA0 1049 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 GPD1LQ8N335 351 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 CACTINQ8WUQ7 758 aaKnown RBP13.18□□□□□ -0.3
PTPRR-209ENST00000549308 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 BORCS6Q96GS4 357 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 FDXACB1Q9BRP7 624 aaPredicted RBP13.18□□□□□ -0.3
PTPRR-209ENST00000549308 INO80BQ9C086 356 aaPredicted RBP13.18□□□□□ -0.3
PTPRR-209ENST00000549308 KCNF1Q9H3M0 494 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 HMX1Q9NP08 348 aaPredicted RBP13.18□□□□□ -0.3
PTPRR-209ENST00000549308 HDAC6Q9UBN7 1215 aa13.18□□□□□ -0.3
PTPRR-209ENST00000549308 SMIM35A0A1B0GVV1 85 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 MBLAC1A4D2B0 266 aaPredicted RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 MAPK13O15264 365 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 EDN1P05305 212 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ASGR1P07306 291 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 KLK7P49862 253 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 GPC3P51654 580 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 C1QTNF8P60827 252 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 MBTD1Q05BQ5 628 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 RBL2Q08999 1139 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 BFSP1Q12934 665 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 KCNA10Q16322 511 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 NBPF20Q3BBV1 942 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ZPBP2Q6X784 338 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 RUFY4Q6ZNE9 571 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 RNF180Q86T96 592 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 CCDC155Q8N6L0 562 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 PCSK9Q8NBP7 692 aaKnown RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ZSWIM2Q8NEG5 633 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ZBTB45Q96K62 511 aaPredicted RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 NFKBIZQ9BYH8 718 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 MMRN2Q9H8L6 949 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ANKFY1Q9P2R3 1169 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 STYXL1Q9Y6J8 313 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 KIAA0391O15091 583 aaKnown RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 TREHO43280 583 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 NRDCO43847 1150 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 MSCO60682 206 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 CST5P28325 142 aaPredicted RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 CASP14P31944 242 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 VAMP7P51809 220 aa13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ADKP55263 362 aaKnown RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 NLRP11P59045 1033 aaKnown RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 ZNF200P98182 395 aaPredicted RBP13.17□□□□□ -0.3
PTPRR-209ENST00000549308 LRMPQ12912 555 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms