RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 PRKCQQ04759 706 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 ZBTB41Q5SVQ8 909 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 STPG1Q5TH74 334 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 PARM1Q6UWI2 310 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 PPFIBP1Q86W92 1011 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 ZNF707Q96C28 371 aaPredicted RBP15.87■□□□□ 0.13
PTCH1-217ENST00000548420 PCYT2Q99447 389 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 ERAP1Q9NZ08 941 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 GINS2Q9Y248 185 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 LAMA1P25391 3075 aa15.87■□□□□ 0.13
PTCH1-217ENST00000548420 LILRB3O75022 631 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 ATP9AO75110 1047 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 RFPL2O75678 378 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 SEC24BO95487 1268 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 RPLP2P05387 115 aaKnown RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 RPS9P46781 194 aaKnown RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 GIT2Q14161 759 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 SIM2Q14190 667 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 NTRK3Q16288 839 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 AASDHQ4L235 1098 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 C19orf48Q6RUI8 117 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 DDX53Q86TM3 631 aaKnown RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 FAM228AQ86W67 206 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 FCHSD1Q86WN1 690 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 TEX2Q8IWB9 1127 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 STAMQ92783 540 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 TMEM169Q96HH4 297 aa15.86■□□□□ 0.13
PTCH1-217ENST00000548420 V9GY48 417 aaPredicted RBP15.86■□□□□ 0.13
PTCH1-217ENST00000548420 FREM2Q5SZK8 3169 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 RRN3P2A6NIE6 340 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 FIBPO43427 364 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 KLRC2P26717 231 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 POLGP54098 1239 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-217ENST00000548420 BMS1Q14692 1282 aaKnown RBP15.85■□□□□ 0.13
PTCH1-217ENST00000548420 PLCB4Q15147 1175 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 TYW1BQ6NUM6 668 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 USP17L6PQ6QN14 398 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 PDZD3Q86UT5 571 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 ZNF687Q8N1G0 1237 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 KIF12Q96FN5 646 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 ZNF274Q96GC6 653 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-217ENST00000548420 SCNM1Q9BWG6 230 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 RHOBTB2Q9BYZ6 727 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 PSTPIP2Q9H939 334 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 MAN1C1Q9NR34 630 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 TENM4Q6N022 2769 aa15.85■□□□□ 0.13
PTCH1-217ENST00000548420 EVPLQ92817 2033 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 SMIM35A0A1B0GVV1 85 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 hCG_1984214I3L0E3 225 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 INPPL1O15357 1258 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 ALDH7A1P49419 539 aaKnown RBP15.84■□□□□ 0.13
PTCH1-217ENST00000548420 GNPTABQ3T906 1256 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 WWC2Q6AWC2 1192 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 GET4Q7L5D6 327 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-217ENST00000548420 NME8Q8N427 588 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 ZNF713Q8N859 430 aaPredicted RBP15.84■□□□□ 0.13
PTCH1-217ENST00000548420 IGSF21Q96ID5 467 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 SENP7Q9BQF6 1050 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 F5P12259 2224 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 TICRRQ7Z2Z1 1910 aa15.84■□□□□ 0.13
PTCH1-217ENST00000548420 HOXA2O43364 376 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 PRPF3O43395 683 aaKnown RBP15.83■□□□□ 0.12
PTCH1-217ENST00000548420 STAM2O75886 525 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 RSPO2Q6UXX9 243 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-217ENST00000548420 HEATR3Q7Z4Q2 680 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-217ENST00000548420 ECHDC2Q86YB7 292 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 FAM160A2Q8N612 972 aaPredicted RBP15.83■□□□□ 0.12
PTCH1-217ENST00000548420 HELQQ8TDG4 1101 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 SEPT1Q8WYJ6 367 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 SMG7Q92540 1137 aaKnown RBP15.83■□□□□ 0.12
PTCH1-217ENST00000548420 CUL5Q93034 780 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 IGSF5Q9NSI5 407 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 PDRG1Q9NUG6 133 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 BARHL2Q9NY43 387 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 CACNA2D2Q9NY47 1150 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 GPSM3Q9Y4H4 160 aa15.83■□□□□ 0.12
PTCH1-217ENST00000548420 GPR182O15218 404 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 FOXD2O60548 495 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-217ENST00000548420 PAPLNO95428 1278 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 IFNAR1P17181 557 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 NRLP54845 237 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 PFKFB3Q16875 520 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-217ENST00000548420 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 PCNX4Q63HM2 1172 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 PPP1R18Q6NYC8 613 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 MTHFD1LQ6UB35 978 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 KIAA0319LQ8IZA0 1049 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 ABI1Q8IZP0 508 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 SMARCC2Q8TAQ2 1214 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 PPP1R16BQ96T49 567 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 RIC8AQ9NPQ8 531 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTCH1-217ENST00000548420 ANKFY1Q9P2R3 1169 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 NAP1L2Q9ULW6 460 aaPredicted RBP15.82■□□□□ 0.12
PTCH1-217ENST00000548420 ASXL3Q9C0F0 2248 aa15.82■□□□□ 0.12
PTCH1-217ENST00000548420 SSBP05455 408 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTCH1-217ENST00000548420 KCNA2P16389 499 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms