RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 ZC3H11AO75152 810 aaKnown RBP eCLIP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 MYBP10242 640 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 SREBF1P36956 1147 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 ACTR2P61160 394 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 HMGN5P82970 282 aaKnown RBP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 CSTF1Q05048 431 aaKnown RBP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 MTMR1Q13613 665 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 TRIM29Q14134 588 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 ZNF528Q3MIS6 628 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 DCLRE1AQ6PJP8 1040 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 TSSK4Q6SA08 328 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 C15orf39Q6ZRI6 1047 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 DAGLBQ8NCG7 672 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 RNF169Q8NCN4 708 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 NELL1Q92832 810 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 COL26A1Q96A83 441 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 TMEM169Q96HH4 297 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 LLPHQ9BRT6 129 aaKnown RBP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 RPP25Q9BUL9 199 aaKnown RBP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 JPH1Q9HDC5 661 aaPredicted RBP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 WDR6Q9NNW5 1121 aaKnown RBP11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 SLC9A2Q9UBY0 812 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 PCDHA4Q9UN74 947 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 KCNJ14Q9UNX9 436 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 PCDHGA2Q9Y5H1 932 aa11.1□□□□□ -0.63
R3HDM2-210ENST00000547019 COL4A2P08572 1712 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 LAMA1P25391 3075 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 MEIS3P2A8K0S8 358 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 SLC30A4O14863 429 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 ADAMTS3O15072 1205 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 HOXA2O43364 376 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 GDF9O60383 454 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 RFPL2O75678 378 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 C22orf31O95567 290 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 CNPP09543 421 aaKnown RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 FDPSP14324 419 aaKnown RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 ATP4AP20648 1035 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 PMLP29590 882 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 STARD6P59095 220 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 SPEM2Q0P670 501 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 ITGB3BPQ13352 177 aaPredicted RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 HTR4Q13639 388 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 LPAL2Q16609 132 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 GALNT17Q6IS24 598 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 DDX53Q86TM3 631 aaKnown RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 ABI1Q8IZP0 508 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 GPR161Q8N6U8 529 aaKnown RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 IGSF21Q96ID5 467 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 ZNF668Q96K58 619 aaPredicted RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 KLHL5Q96PQ7 755 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 DDX23Q9BUQ8 820 aaKnown RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 PHF20Q9BVI0 1012 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 BRMS1Q9HCU9 246 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 MAN1C1Q9NR34 630 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 SLC2A4RGQ9NR83 387 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 SPATA6Q9NWH7 488 aaPredicted RBP11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 DNAJB4Q9UDY4 337 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 FBXO4Q9UKT5 387 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 NOTCH4Q99466 2003 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 GREB1Q4ZG55 1949 aa11.09□□□□□ -0.63
R3HDM2-210ENST00000547019 LOC400499M0QZD8 3231 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 IGF2RP11717 2491 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 ARID2Q68CP9 1835 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 ANHXE9PGG2 379 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 LILRB3O75022 631 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 CCNE2O96020 404 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 SSBP05455 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 FGFR4P22455 802 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 ZNF76P36508 570 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 ALDH7A1P49419 539 aaKnown RBP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 STAT5BP51692 787 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 CLCN3P51790 818 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 POLGP54098 1239 aaPredicted RBP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 PLPPR4Q7Z2D5 763 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 CCDC60Q8IWA6 550 aaPredicted RBP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 ZNF707Q96C28 371 aaPredicted RBP11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 AZI2Q9H6S1 392 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 NRDE2Q9H7Z3 1164 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 KIF3AQ9Y496 699 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 NUMBLQ9Y6R0 609 aa11.08□□□□□ -0.64
R3HDM2-210ENST00000547019 AKAP13Q12802 2813 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 IGKV6D-21A0A0A0MT36 114 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 LAMTOR5O43504 91 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 ATG7O95352 703 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 GALTP07902 379 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 CD72P21854 359 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 KRT2P35908 639 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 SLC11A1P49279 550 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 GUCY1B3Q02153 619 aa11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 SNW1Q13573 536 aaKnown RBP11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
R3HDM2-210ENST00000547019 NPY5RQ15761 445 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms