RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 NAGAP17050 411 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 DDX5P17844 614 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 HOXC13P31276 330 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 NUDT1P36639 197 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 STAT3P40763 770 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 IFNAR2P48551 515 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 SARSP49591 514 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 RGS7P49802 495 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ALDH5A1P51649 535 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 HSD17B4P51659 736 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ARFIP2P53365 341 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 NUP107P57740 925 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 XIAPP98170 497 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CHRNEQ04844 493 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 GRSF1Q12849 480 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 SP140Q13342 867 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CUL1Q13616 776 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 RCN2Q14257 317 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 SEMA3AQ14563 771 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ANKRD1Q15327 319 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 UBE3CQ15386 1083 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CCDC6Q16204 474 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 SHROOM1Q2M3G4 852 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 MTERF2Q49AM1 385 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CDONQ4KMG0 1287 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 PKDCCQ504Y2 493 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 TTMPQ5BVD1 217 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 HABP4Q5JVS0 413 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 C4orf22Q6V702 233 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CAPN12Q6ZSI9 719 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 SND1Q7KZF4 910 aaKnown RBP eCLIP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 TMC7Q7Z402 723 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 PIGWQ7Z7B1 504 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 MRPL10Q7Z7H8 261 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 GALNT7Q86SF2 657 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 NOP9Q86U38 636 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 LONP2Q86WA8 852 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 HEATR4Q86WZ0 1026 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 RNF135Q8IUD6 432 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 TMTC1Q8IUR5 882 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 MMAAQ8IVH4 418 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 PLEKHM2Q8IWE5 1019 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 IQCKQ8N0W5 287 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CADM3Q8N126 398 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CSGALNACT2Q8N6G5 542 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 AOPEPQ8N6M6 819 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ATP6V0D2Q8N8Y2 350 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 RNF169Q8NCN4 708 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 GALNT11Q8NCW6 608 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 TTLL11Q8NHH1 800 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 HELQQ8TDG4 1101 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 DDI1Q8WTU0 396 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 GAB3Q8WWW8 586 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CIDECQ96AQ7 238 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 LTV1Q96GA3 475 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF333Q96JL9 665 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 BIRC8Q96P09 236 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 FNBP1Q96RU3 617 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 SECISBP2Q96T21 854 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CIB1Q99828 191 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 HEPHQ9BQS7 1158 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ANKRD2Q9GZV1 360 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 STMN4Q9H169 189 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ASCC2Q9H1I8 757 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 OSBPL3Q9H4L5 887 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CCDC134Q9H6E4 229 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CYP4F11Q9HBI6 524 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 PPANQ9NQ55 473 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 FARSBQ9NSD9 589 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 GMIPQ9P107 970 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ZNF212Q9UDV6 495 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 DNAJB4Q9UDY4 337 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 KCNN3Q9UGI6 736 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 DACH1Q9UI36 760 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 FBXL5Q9UKA1 691 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 DNM3Q9UQ16 869 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 ERVK-11Q9UQG0 969 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 RRP7AQ9Y3A4 280 aaKnown RBP5.54□□□□□ -1.52
SNHG1-218ENST00000541615 NOX1Q9Y5S8 564 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 BCL9O00512 1426 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CARMIL2Q6F5E8 1435 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 IQGAP2Q13576 1575 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CDC42BPAQ5VT25 1732 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 CEMIPQ8WUJ3 1361 aa5.54□□□□□ -1.52
SNHG1-218ENST00000541615 EFCAB6Q5THR3 1501 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 LAMC1P11047 1609 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ST20-MTHFSA0A0A6YYL1 179 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 TMEM238LA0A1B0GVL6 79 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 GOLGA8IPA6NC78 632 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 A6NJR5 290 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 OR6C65A6NJZ3 312 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 MIF4GDA9UHW6 222 aaKnown RBP5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RSPH10B2B2RC85 870 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 RGS13O14921 159 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 BET1O15155 118 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 PLSCR1O15162 318 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 ATP9AO75110 1047 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 UFL1O94874 794 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 CHEK2O96017 543 aa5.53□□□□□ -1.52
SNHG1-218ENST00000541615 S100BP04271 92 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms